RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 HIDE1A8MVS5 230 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 C2CD4DB7Z1M9 353 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 FSCN2O14926 492 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 ASGR2P07307 311 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 LAG3P18627 525 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 NBL1P41271 181 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 ID4P47928 161 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 TROAPQ12815 778 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
PRPF8-208ENST00000573716 SART3Q15020 963 aaKnown RBP13.96□□□□□ -0.17
PRPF8-208ENST00000573716 UBE2SQ16763 222 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 TPRNQ4KMQ1 711 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 CES5AQ6NT32 575 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 TMC7Q7Z402 723 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 RALYLQ86SE5 291 aaKnown RBP13.96□□□□□ -0.17
PRPF8-208ENST00000573716 ADSSL1Q8N142 457 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 MRPS27Q92552 414 aaKnown RBP13.96□□□□□ -0.17
PRPF8-208ENST00000573716 PCYT2Q99447 389 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 ATP6V0A4Q9HBG4 840 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 ERVK-5Q9HDB9 667 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 SLC9A2Q9UBY0 812 aa13.96□□□□□ -0.17
PRPF8-208ENST00000573716 NOC2LQ9Y3T9 749 aaKnown RBP13.96□□□□□ -0.17
PRPF8-208ENST00000573716 EVPLQ92817 2033 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 CACNA1AO00555 2505 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 SPDYE3A6NKU9 549 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 PIK3CDO00329 1044 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 WEE2P0C1S8 567 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 HOXB8P17481 243 aaPredicted RBP13.95□□□□□ -0.18
PRPF8-208ENST00000573716 PBX3P40426 434 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 ASTLQ6HA08 431 aaPredicted RBP13.95□□□□□ -0.18
PRPF8-208ENST00000573716 MTHFD1LQ6UB35 978 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 SLC24A5Q71RS6 500 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 ERMP1Q7Z2K6 904 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 PLEKHM2Q8IWE5 1019 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 FLCNQ8NFG4 579 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 CTCFLQ8NI51 663 aaPredicted RBP13.95□□□□□ -0.18
PRPF8-208ENST00000573716 MYL10Q9BUA6 226 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 POMKQ9H5K3 350 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 PSTPIP2Q9H939 334 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 CDHR5Q9HBB8 845 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 C1orf112Q9NSG2 853 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 ST3GAL5Q9UNP4 418 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 UBIAD1Q9Y5Z9 338 aa13.95□□□□□ -0.18
PRPF8-208ENST00000573716 KDM3AQ9Y4C1 1321 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 SMIM35A0A1B0GVV1 85 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 KLRC1P26715 233 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 PDE4AP27815 886 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 STAT5BP51692 787 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 KCNC3Q14003 757 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 NME8Q8N427 588 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 CASP10Q92851 521 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 SDF4Q9BRK5 362 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 CWH43Q9H720 699 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 NGRNQ9NPE2 291 aaKnown RBP13.94□□□□□ -0.18
PRPF8-208ENST00000573716 JADE2Q9NQC1 790 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 LZTS1Q9Y250 596 aa13.94□□□□□ -0.18
PRPF8-208ENST00000573716 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 C9IYK1 514 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 BACH1O14867 736 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 KIF5BP33176 963 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 ACTR2P61160 394 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 KRT17Q04695 432 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 ODR4Q5SWX8 454 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 RARS2Q5T160 578 aaKnown RBP13.93□□□□□ -0.18
PRPF8-208ENST00000573716 MCTP2Q6DN12 878 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 KCNT2Q6UVM3 1135 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 ABI1Q8IZP0 508 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
PRPF8-208ENST00000573716 TDRD5Q8NAT2 981 aaKnown RBP13.93□□□□□ -0.18
PRPF8-208ENST00000573716 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 RASGRP4Q8TDF6 673 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 TMEM40Q8WWA1 233 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 ZNF558Q96NG5 402 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 NECTIN4Q96NY8 510 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 SPZ1Q9BXG8 430 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 IL25Q9H293 177 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 TMEM161AQ9NX61 479 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 LIMD1Q9UGP4 676 aa13.93□□□□□ -0.18
PRPF8-208ENST00000573716 DDX39AO00148 427 aaKnown RBP13.92□□□□□ -0.18
PRPF8-208ENST00000573716 GPR182O15218 404 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 MTHFRP42898 656 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 PLCB3Q01970 1234 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 KIZQ2M2Z5 673 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 PLPPR4Q7Z2D5 763 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 CHD1LQ86WJ1 897 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 ZNF654Q8IZM8 581 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 C12orf76Q8N812 135 aaPredicted RBP13.92□□□□□ -0.18
PRPF8-208ENST00000573716 NCOA7Q8NI08 942 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 KCNG4Q8TDN1 519 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 OSMRQ99650 979 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 ADAM7Q9H2U9 754 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 KCNH7Q9NS40 1196 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 SPG21Q9NZD8 308 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 DBR1Q9UK59 544 aaKnown RBP13.92□□□□□ -0.18
PRPF8-208ENST00000573716 PCDHA6Q9UN73 950 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 PCDHA8Q9Y5H6 950 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 HCFC2Q9Y5Z7 792 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms