RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CNKSR3Q6P9H4 555 aa15.19■□□□□ 0.02
RPAIN-213ENST00000573577 RSPH3Q86UC2 560 aa15.19■□□□□ 0.02
RPAIN-213ENST00000573577 TRAPPC12Q8WVT3 735 aa15.19■□□□□ 0.02
RPAIN-213ENST00000573577 ZBTB10Q96DT7 871 aa15.19■□□□□ 0.02
RPAIN-213ENST00000573577 GRXCR1A8MXD5 290 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 RPLP2P05387 115 aaKnown RBP15.18■□□□□ 0.02
RPAIN-213ENST00000573577 P4HBP07237 508 aaKnown RBP15.18■□□□□ 0.02
RPAIN-213ENST00000573577 ZSCAN22P10073 491 aaPredicted RBP15.18■□□□□ 0.02
RPAIN-213ENST00000573577 ATP2A2P16615 1042 aaKnown RBP15.18■□□□□ 0.02
RPAIN-213ENST00000573577 DNAJB2P25686 324 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 PSMC5P62195 406 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 SPIRE1Q08AE8 756 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 FAM26DQ5JW98 314 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 ZNF697Q5TEC3 545 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 ERMNQ8TAM6 284 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 NEK9Q8TD19 979 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 DNAJB3Q8WWF6 145 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 BBXQ8WY36 941 aaPredicted RBP15.18■□□□□ 0.02
RPAIN-213ENST00000573577 PBX4Q9BYU1 374 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 NRBP2Q9NSY0 501 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 STK24Q9Y6E0 443 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 COL1A2P08123 1366 aa15.18■□□□□ 0.02
RPAIN-213ENST00000573577 TMEM265A0A087WTH1 108 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 ZBTB42B2RXF5 422 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 EML1O00423 815 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 PBX2P40425 430 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 TECP42680 631 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 QARSP47897 775 aaKnown RBP15.17■□□□□ 0.02
RPAIN-213ENST00000573577 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
RPAIN-213ENST00000573577 ATP2C1P98194 919 aaPredicted RBP15.17■□□□□ 0.02
RPAIN-213ENST00000573577 RAB30Q15771 203 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 TCTN1Q2MV58 587 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 ZNF484Q5JVG2 852 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
RPAIN-213ENST00000573577 MTHFD1LQ6UB35 978 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 DTHD1Q6ZMT9 781 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 C4orf32Q8N8J7 132 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 SLC9A7Q96T83 725 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 FAM49AQ9H0Q0 323 aaPredicted RBP15.17■□□□□ 0.02
RPAIN-213ENST00000573577 MTMR10Q9NXD2 777 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 PCDHA2Q9Y5H9 948 aa15.17■□□□□ 0.02
RPAIN-213ENST00000573577 SMIM35A0A1B0GVV1 85 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 ABHD14A-ACY1A0A1B0GW23 586 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 ZNF862O60290 1169 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 EFCAB14O75071 495 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 F13A1P00488 732 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 CHRNA1P02708 482 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 OATP04181 439 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 KLRC1P26715 233 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 KCNJ6P48051 423 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 WDR5P61964 334 aaKnown RBP15.16■□□□□ 0.02
RPAIN-213ENST00000573577 PRKCEQ02156 737 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 MGAT3Q09327 533 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 IKBKEQ14164 716 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 PDIA5Q14554 519 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 SF3A1Q15459 793 aaKnown RBP15.16■□□□□ 0.02
RPAIN-213ENST00000573577 UGCGQ16739 394 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 PLEKHG4Q58EX7 1191 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 HAUS3Q68CZ6 603 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 TRMT1LQ7Z2T5 733 aaKnown RBP15.16■□□□□ 0.02
RPAIN-213ENST00000573577 BANK1Q8NDB2 785 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 DBF4BQ8NFT6 615 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 PHOSPHO2Q8TCD6 241 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 TIFAQ96CG3 184 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 FAM161BQ96MY7 647 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 ZNF396Q96N95 335 aaPredicted RBP15.16■□□□□ 0.02
RPAIN-213ENST00000573577 TTYH1Q9H313 450 aaPredicted RBP15.16■□□□□ 0.02
RPAIN-213ENST00000573577 ZSWIM4Q9H7M6 989 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 MSRAQ9UJ68 235 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 TET1Q8NFU7 2136 aa15.16■□□□□ 0.02
RPAIN-213ENST00000573577 POTEMA6NI47 508 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 RBAK-RBAKDNI3L0D1 243 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 C22orf31O95567 290 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 MRPS6P82932 125 aaKnown RBP15.15■□□□□ 0.02
RPAIN-213ENST00000573577 XKR3Q5GH77 459 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 C4orf19Q8IY42 314 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 SEPT8Q92599 483 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 EIF2AK1Q9BQI3 630 aaKnown RBP15.15■□□□□ 0.02
RPAIN-213ENST00000573577 LXNQ9BS40 222 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 OSBPL7Q9BZF2 842 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 LRWD1Q9UFC0 647 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 PCDHA11Q9Y5I1 949 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 CDY2AQ9Y6F7 541 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 KAT6AQ92794 2004 aa15.15■□□□□ 0.02
RPAIN-213ENST00000573577 M0QZ92 97 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 RABGGTBP53611 331 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 FOXD4L5Q5VV16 416 aaPredicted RBP15.14■□□□□ 0.01
RPAIN-213ENST00000573577 IER5Q5VY09 327 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 ATL3Q6DD88 541 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 OTUD6AQ7L8S5 288 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 HERC6Q8IVU3 1022 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 TPH2Q8IWU9 490 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 NME8Q8N427 588 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 IGSF22Q8N9C0 903 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 FOXD4L4Q8WXT5 416 aaPredicted RBP15.14■□□□□ 0.01
RPAIN-213ENST00000573577 APBB2Q92870 758 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 DYDC2Q96IM9 177 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 HSD17B14Q9BPX1 270 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 IFIH1Q9BYX4 1025 aaKnown RBP15.14■□□□□ 0.01
RPAIN-213ENST00000573577 SEMA6BQ9H3T3 888 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms