RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 SPATA31C2B4DYI2 1134 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 CLASP2O75122 1294 aaKnown RBP15.08■□□□□ 0
CCDC40-208ENST00000572270 PDE4AP27815 886 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 LMNB2Q03252 620 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 VARS2Q5ST30 1063 aaKnown RBP15.08■□□□□ 0
CCDC40-208ENST00000572270 MARCH8Q5T0T0 291 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 FAM43BQ6ZT52 329 aaPredicted RBP15.08■□□□□ 0
CCDC40-208ENST00000572270 SUMF1Q8NBK3 374 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 ESR2Q92731 530 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 GLG1Q92896 1179 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 ZNF558Q96NG5 402 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 CELF4Q9BZC1 486 aaKnown RBP15.08■□□□□ 0
CCDC40-208ENST00000572270 TMX1Q9H3N1 280 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 KCNK12Q9HB15 430 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 ATP6V0A4Q9HBG4 840 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 WNT16Q9UBV4 365 aa15.08■□□□□ 0
CCDC40-208ENST00000572270 C2orf71A6NGG8 1288 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 RRN3P2A6NIE6 340 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 SPDYE4A6NLX3 237 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 CFHP08603 1231 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 HAND2P61296 217 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 MRPS9P82933 396 aaKnown RBP15.07■□□□□ 0
CCDC40-208ENST00000572270 SEMA3FQ13275 785 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 NONOQ15233 471 aaKnown RBP eCLIP15.07■□□□□ 0
CCDC40-208ENST00000572270 TMEM266Q2M3C6 531 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 CCDC178Q5BJE1 867 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 ODR4Q5SWX8 454 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 KCNT2Q6UVM3 1135 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 SLC24A5Q71RS6 500 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 IQCA1Q86XH1 822 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 C1orf210Q8IVY1 113 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 MRPL43Q8N983 215 aaKnown RBP15.07■□□□□ 0
CCDC40-208ENST00000572270 GIMAP8Q8ND71 665 aaPredicted RBP15.07■□□□□ 0
CCDC40-208ENST00000572270 ADAM2Q99965 735 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 SENP7Q9BQF6 1050 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 TBC1D17Q9HA65 648 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 RTEL1Q9NZ71 1219 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 IGSF9Q9P2J2 1179 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 TELO2Q9Y4R8 837 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 SPTBN2O15020 2390 aa15.07■□□□□ 0
CCDC40-208ENST00000572270 USP24Q9UPU5 2620 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 DCDC2BA2VCK2 349 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 FGAP02671 866 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 DCNP07585 359 aaKnown RBP15.06■□□□□ 0
CCDC40-208ENST00000572270 TRAF1Q13077 416 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 TNPO1Q92973 898 aaKnown RBP15.06■□□□□ 0
CCDC40-208ENST00000572270 BORCS6Q96GS4 357 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 SMARCAD1Q9H4L7 1026 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 RNF41Q9H4P4 317 aaPredicted RBP15.06■□□□□ 0
CCDC40-208ENST00000572270 RGS18Q9NS28 235 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 SPG21Q9NZD8 308 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 RALYQ9UKM9 306 aaKnown RBP15.06■□□□□ 0
CCDC40-208ENST00000572270 CA14Q9ULX7 337 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 TTC41PQ6P2S7 1318 aa15.06■□□□□ 0
CCDC40-208ENST00000572270 KRBA1A5PL33 1030 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 SPTLC1O15269 473 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 NARSO43776 548 aaKnown RBP15.05■□□□□ -0
CCDC40-208ENST00000572270 MGEA5O60502 916 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 FGFR1P11362 822 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 KRT76Q01546 638 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 DMWDQ09019 674 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 ACAP1Q15027 740 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 KANK3Q6NY19 840 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 TMC5Q6UXY8 1006 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 CABP7Q86V35 215 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 LRRC43Q8N309 656 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 SEPT1Q8WYJ6 367 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 ZBTB10Q96DT7 871 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 TMEM117Q9H0C3 514 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 TMEM161AQ9NX61 479 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 SIT1Q9Y3P8 196 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 KDM3AQ9Y4C1 1321 aa15.05■□□□□ -0
CCDC40-208ENST00000572270 CHD8Q9HCK8 2581 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 ATRXP46100 2492 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 ZMYM6O95789 1325 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 FRMPD4Q14CM0 1322 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.04■□□□□ -0
CCDC40-208ENST00000572270 C9IYK1 514 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 ZBTB5O15062 677 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 HOXA2O43364 376 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 RPS6KA5O75582 802 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 PBX3P40426 434 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 NLRX1Q86UT6 975 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 ABI1Q8IZP0 508 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 NME8Q8N427 588 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 SFXN1Q9H9B4 322 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 USP18Q9UMW8 372 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 GINS2Q9Y248 185 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 PCDHA2Q9Y5H9 948 aa15.04■□□□□ -0
CCDC40-208ENST00000572270 PPP1R11O60927 126 aaPredicted RBP15.03■□□□□ -0
CCDC40-208ENST00000572270 CXCL14O95715 111 aa15.03■□□□□ -0
CCDC40-208ENST00000572270 INSRRP14616 1297 aa15.03■□□□□ -0
CCDC40-208ENST00000572270 PHLDB3Q6NSJ2 640 aa15.03■□□□□ -0
CCDC40-208ENST00000572270 ELAC1Q9H777 363 aaKnown RBP15.03■□□□□ -0
CCDC40-208ENST00000572270 NEDD4P46934 1319 aa15.02■□□□□ -0
CCDC40-208ENST00000572270 GPR182O15218 404 aa15.02■□□□□ -0
CCDC40-208ENST00000572270 EPCAMP16422 314 aa15.02■□□□□ -0
CCDC40-208ENST00000572270 NT5C2P49902 561 aa15.02■□□□□ -0
CCDC40-208ENST00000572270 GIT2Q14161 759 aa15.02■□□□□ -0
CCDC40-208ENST00000572270 GPR149Q86SP6 731 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms