RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 GRAMD1CQ8IYS0 662 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 STAMQ92783 540 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 FUCA2Q9BTY2 467 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 BLZF1Q9H2G9 400 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 HMX1Q9NP08 348 aaPredicted RBP13.25□□□□□ -0.29
CDRT1-206ENST00000571263 CYP26B1Q9NR63 512 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 EXOC1Q9NV70 894 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 WRAP73Q9P2S5 460 aaPredicted RBP13.25□□□□□ -0.29
CDRT1-206ENST00000571263 SEL1LQ9UBV2 794 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 MAN1B1Q9UKM7 699 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 PTPN22Q9Y2R2 807 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 COL1A2P08123 1366 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 DOCK3Q8IZD9 2030 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 FRMD3A2A2Y4 597 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 H3BRB1 525 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 ZNF862O60290 1169 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 SORBS3O60504 671 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 STBD1O95210 358 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 LGALS2P05162 132 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 PRR29P0C7W0 189 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 IDEP14735 1019 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 GIT2Q14161 759 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 PKN2Q16513 984 aaKnown RBP13.24□□□□□ -0.29
CDRT1-206ENST00000571263 UGCGQ16739 394 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 COBLL1Q53SF7 1204 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 STXBP4Q6ZWJ1 553 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 DYMQ7RTS9 669 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 LRRC15Q8TF66 581 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 SLC7A3Q8WY07 619 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 DNAJC19Q96DA6 116 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 DRC1Q96MC2 740 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 PCYT2Q99447 389 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 UPF3AQ9H1J1 476 aaKnown RBP13.24□□□□□ -0.29
CDRT1-206ENST00000571263 TUT1Q9H6E5 874 aaKnown RBP13.24□□□□□ -0.29
CDRT1-206ENST00000571263 PANK4Q9NVE7 773 aa13.24□□□□□ -0.29
CDRT1-206ENST00000571263 LARSQ9P2J5 1176 aaKnown RBP13.24□□□□□ -0.29
CDRT1-206ENST00000571263 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
CDRT1-206ENST00000571263 MCM3APO60318 1980 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
CDRT1-206ENST00000571263 RRN3P2A6NIE6 340 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 MAGEB2O15479 319 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 KLRC4O43908 158 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 FAM13AO94988 1023 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 MAPTP10636 758 aaKnown RBP13.23□□□□□ -0.29
CDRT1-206ENST00000571263 ELNP15502 786 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 CAPN2P17655 700 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 ATP4AP20648 1035 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 CTCFP49711 727 aaPredicted RBP13.23□□□□□ -0.29
CDRT1-206ENST00000571263 RTP1P59025 263 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 GSE1Q14687 1217 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 PLCB4Q15147 1175 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 FSCN1Q16658 493 aaKnown RBP13.23□□□□□ -0.29
CDRT1-206ENST00000571263 KMT5BQ4FZB7 885 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 ARSHQ5FYA8 562 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 PCSK9Q8NBP7 692 aaKnown RBP13.23□□□□□ -0.29
CDRT1-206ENST00000571263 TRPV1Q8NER1 839 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 KIFAP3Q92845 792 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 BPIFA3Q9BQP9 254 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 C16orf70Q9BSU1 422 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 PARVGQ9HBI0 331 aa13.23□□□□□ -0.29
CDRT1-206ENST00000571263 DDX20Q9UHI6 824 aaKnown RBP13.23□□□□□ -0.29
CDRT1-206ENST00000571263 SMTNL1A8MU46 457 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 H0YCG3 227 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 ZBTB39O15060 712 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 CABYRO75952 493 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 CST5P28325 142 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-206ENST00000571263 ERCC5P28715 1186 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-206ENST00000571263 POLGP54098 1239 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-206ENST00000571263 CAP1Q01518 475 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 ALCAMQ13740 583 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 TARBP2Q15633 366 aaKnown RBP13.22□□□□□ -0.29
CDRT1-206ENST00000571263 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-206ENST00000571263 TMEM63BQ5T3F8 832 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-206ENST00000571263 RNF180Q86T96 592 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 RETREG2Q8NC44 543 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 TCP11Q8WWU5 503 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 DHTKD1Q96HY7 919 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-206ENST00000571263 REEP2Q9BRK0 252 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 XPNPEP3Q9NQH7 507 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 OLFML3Q9NRN5 406 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 TRPC6Q9Y210 931 aa13.22□□□□□ -0.29
CDRT1-206ENST00000571263 A0A087WWV3 80 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 BIN1O00499 593 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 ASAP2O43150 1006 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 MAFO75444 373 aaPredicted RBP13.21□□□□□ -0.29
CDRT1-206ENST00000571263 F2P00734 622 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 INHAP05111 366 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 C6orf222P0C671 652 aaPredicted RBP13.21□□□□□ -0.29
CDRT1-206ENST00000571263 GNAT1P11488 350 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 DNM2P50570 870 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 ZNF131P52739 623 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 SMTNP53814 917 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 EHHADHQ08426 723 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 TBC1D8BQ0IIM8 1120 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 PPP2R5AQ15172 486 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 MTERF2Q49AM1 385 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 ANO6Q4KMQ2 910 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms