RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 METAP2P50579 478 aaKnown RBP eCLIP19.96■□□□□ 0.79
CIITA-206ENST00000571190 NFX1Q12986 1120 aaKnown RBP19.96■□□□□ 0.79
CIITA-206ENST00000571190 ADAM15Q13444 863 aa19.96■□□□□ 0.79
CIITA-206ENST00000571190 CLUL1Q15846 466 aa19.96■□□□□ 0.79
CIITA-206ENST00000571190 FAM160B1Q5W0V3 765 aa19.96■□□□□ 0.79
CIITA-206ENST00000571190 PDXDC2PQ6P474 469 aa19.96■□□□□ 0.79
CIITA-206ENST00000571190 KLHL23Q8NBE8 558 aa19.96■□□□□ 0.79
CIITA-206ENST00000571190 PRKAG3Q9UGI9 489 aa19.96■□□□□ 0.79
CIITA-206ENST00000571190 NAP1L2Q9ULW6 460 aaPredicted RBP19.96■□□□□ 0.79
CIITA-206ENST00000571190 C22orf31O95567 290 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 SARSP49591 514 aaKnown RBP19.95■□□□□ 0.78
CIITA-206ENST00000571190 SMAD2Q15796 467 aaKnown RBP19.95■□□□□ 0.78
CIITA-206ENST00000571190 NAALADL2Q58DX5 795 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 ZNF484Q5JVG2 852 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 MIS18BP1Q6P0N0 1132 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 Q6ZUG5 572 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 ADGRD2Q7Z7M1 963 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 ADHFE1Q8IWW8 467 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 BRF1Q92994 677 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 IGFLR1Q9H665 355 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 GINS2Q9Y248 185 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 MAFBQ9Y5Q3 323 aaPredicted RBP19.95■□□□□ 0.78
CIITA-206ENST00000571190 SNX14Q9Y5W7 946 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 COL1A2P08123 1366 aa19.95■□□□□ 0.78
CIITA-206ENST00000571190 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
CIITA-206ENST00000571190 MBTPS2O43462 519 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 NTRK3Q16288 839 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 RASGRP4Q8TDF6 673 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 ADAM2Q99965 735 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 ZNF577Q9BSK1 485 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 AGXT2Q9BYV1 514 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 ST3GAL5Q9UNP4 418 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 FAM50BQ9Y247 325 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 HCN4Q9Y3Q4 1203 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 NID2Q14112 1375 aa19.94■□□□□ 0.78
CIITA-206ENST00000571190 CCDC196A0A1B0GTZ2 297 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 PRR33A8MZF0 331 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 C9IYK1 514 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 PPFIA3O75145 1194 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 GPR32O75388 356 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 RPS6KA5O75582 802 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 CIITAP33076 1130 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 HSPA4P34932 840 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 ZNF746Q6NUN9 644 aaPredicted RBP19.93■□□□□ 0.78
CIITA-206ENST00000571190 FBXL16Q8N461 479 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 POF1BQ8WVV4 589 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 PHKBQ93100 1093 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 LENG9Q96B70 501 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 MSLNLQ96KJ4 702 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 JAKMIP1Q96N16 626 aaKnown RBP19.93■□□□□ 0.78
CIITA-206ENST00000571190 PPP1R16BQ96T49 567 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 C6orf50Q9HD87 102 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 RGS18Q9NS28 235 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 TBC1D22BQ9NU19 505 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 HCSTQ9UBK5 93 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 PCDHGC5Q9Y5F6 944 aa19.93■□□□□ 0.78
CIITA-206ENST00000571190 DCXO43602 365 aa19.92■□□□□ 0.78
CIITA-206ENST00000571190 ALADP13716 330 aa19.92■□□□□ 0.78
CIITA-206ENST00000571190 IBSPP21815 317 aaPredicted RBP19.92■□□□□ 0.78
CIITA-206ENST00000571190 HOXD11P31277 338 aaPredicted RBP19.92■□□□□ 0.78
CIITA-206ENST00000571190 FGD1P98174 961 aa19.92■□□□□ 0.78
CIITA-206ENST00000571190 KIZQ2M2Z5 673 aa19.92■□□□□ 0.78
CIITA-206ENST00000571190 FAM102BQ5T8I3 360 aa19.92■□□□□ 0.78
CIITA-206ENST00000571190 FAM228AQ86W67 206 aa19.92■□□□□ 0.78
CIITA-206ENST00000571190 REXO1Q8N1G1 1221 aaKnown RBP19.92■□□□□ 0.78
CIITA-206ENST00000571190 BBXQ8WY36 941 aaPredicted RBP19.92■□□□□ 0.78
CIITA-206ENST00000571190 CLEC1BQ9P126 229 aa19.92■□□□□ 0.78
CIITA-206ENST00000571190 LRFN2Q9ULH4 789 aa19.92■□□□□ 0.78
CIITA-206ENST00000571190 TTC3P53804 2025 aa19.92■□□□□ 0.78
CIITA-206ENST00000571190 VTNP04004 478 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 CRYBB1P53674 252 aaPredicted RBP19.91■□□□□ 0.78
CIITA-206ENST00000571190 FAM189BP81408 668 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 SETQ01105 290 aaPredicted RBP19.91■□□□□ 0.78
CIITA-206ENST00000571190 SMAD4Q13485 552 aaKnown RBP19.91■□□□□ 0.78
CIITA-206ENST00000571190 DSC3Q14574 896 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 PRR16Q569H4 304 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 MCTP2Q6DN12 878 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 FAM43BQ6ZT52 329 aaPredicted RBP19.91■□□□□ 0.78
CIITA-206ENST00000571190 SLC24A5Q71RS6 500 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 TRMT1LQ7Z2T5 733 aaKnown RBP19.91■□□□□ 0.78
CIITA-206ENST00000571190 LINC01465Q8N7H1 131 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 OSMRQ99650 979 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 GABBR1Q9UBS5 961 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 PCDHB7Q9Y5E2 793 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 PCDHA10Q9Y5I2 948 aa19.91■□□□□ 0.78
CIITA-206ENST00000571190 GPR182O15218 404 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 ZNF862O60290 1169 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 EYA4O95677 639 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 GLP2RO95838 553 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 RPS6KB1P23443 525 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 BLOC1S2Q6QNY1 142 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 CKAP2LQ8IYA6 745 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 SMAP1Q8IYB5 467 aaPredicted RBP19.9■□□□□ 0.78
CIITA-206ENST00000571190 EFHBQ8N7U6 833 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 C1orf112Q9NSG2 853 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 CD207Q9UJ71 328 aa19.9■□□□□ 0.78
CIITA-206ENST00000571190 DENND3A2RUS2 1198 aa19.89■□□□□ 0.77
CIITA-206ENST00000571190 TBKBP1A7MCY6 615 aa19.89■□□□□ 0.77
CIITA-206ENST00000571190 PSAPP07602 524 aa19.89■□□□□ 0.77
CIITA-206ENST00000571190 NRIP1P48552 1158 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms