RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 CEP55Q53EZ4 464 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 STXBP4Q6ZWJ1 553 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 DESI2Q9BSY9 194 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 TTYH3Q9C0H2 523 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 RBPJLQ9UBG7 517 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 VAV3Q9UKW4 847 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 CETN3O15182 167 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 ADCY3O60266 1144 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 HOXA13P31271 388 aaPredicted RBP21.56■■□□□ 1.04
SPNS2-203ENST00000570979 CCDC40Q4G0X9 1142 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 CCDC174Q6PII3 467 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 LRRC55Q6ZSA7 311 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 SLC5A5Q92911 643 aa21.56■■□□□ 1.04
SPNS2-203ENST00000570979 ARGLU1Q9NWB6 273 aaPredicted RBP21.56■■□□□ 1.04
SPNS2-203ENST00000570979 IGLV3-22A0A075B6J6 115 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 CTAGE9A4FU28 777 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 CALUO43852 315 aaPredicted RBP21.55■■□□□ 1.04
SPNS2-203ENST00000570979 TBCAO75347 108 aaKnown RBP21.55■■□□□ 1.04
SPNS2-203ENST00000570979 SPATA31C1P0DKV0 1188 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 RPL13P26373 211 aaKnown RBP21.55■■□□□ 1.04
SPNS2-203ENST00000570979 ERVK-24P63145 666 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 GHRHRQ02643 423 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 MTF1Q14872 753 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 Q3C1V9 767 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 LRCH2Q5VUJ6 765 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 RIT2Q99578 217 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 EIF2AK1Q9BQI3 630 aaKnown RBP21.55■■□□□ 1.04
SPNS2-203ENST00000570979 SLF1Q9BQI6 1058 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 TSGA10Q9BZW7 698 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 MAF1Q9H063 256 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 SEL1LQ9UBV2 794 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 CTDP1Q9Y5B0 961 aaPredicted RBP21.55■■□□□ 1.04
SPNS2-203ENST00000570979 PCDHA2Q9Y5H9 948 aa21.55■■□□□ 1.04
SPNS2-203ENST00000570979 EIF3CLB5ME19 914 aaKnown RBP21.54■■□□□ 1.04
SPNS2-203ENST00000570979 KRT86O43790 486 aa21.54■■□□□ 1.04
SPNS2-203ENST00000570979 VCAM1P19320 739 aa21.54■■□□□ 1.04
SPNS2-203ENST00000570979 CEP112Q8N8E3 955 aa21.54■■□□□ 1.04
SPNS2-203ENST00000570979 SLAIN1Q8ND83 568 aa21.54■■□□□ 1.04
SPNS2-203ENST00000570979 NACC1Q96RE7 527 aa21.54■■□□□ 1.04
SPNS2-203ENST00000570979 EIF3CQ99613 913 aaKnown RBP21.54■■□□□ 1.04
SPNS2-203ENST00000570979 MRPL44Q9H9J2 332 aaKnown RBP21.54■■□□□ 1.04
SPNS2-203ENST00000570979 LZTFL1Q9NQ48 299 aa21.54■■□□□ 1.04
SPNS2-203ENST00000570979 OGFRQ9NZT2 677 aa21.54■■□□□ 1.04
SPNS2-203ENST00000570979 GJD2Q9UKL4 321 aa21.54■■□□□ 1.04
SPNS2-203ENST00000570979 PLXNB2O15031 1838 aa21.54■■□□□ 1.04
SPNS2-203ENST00000570979 PDXKO00764 312 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 GAS7O60861 476 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 CCL5P13501 91 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 IRF5Q13568 498 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 GIT2Q14161 759 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 POTEGQ6S5H5 508 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 ZC3H3Q8IXZ2 948 aaKnown RBP21.53■■□□□ 1.04
SPNS2-203ENST00000570979 NEK11Q8NG66 645 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 TSC1Q92574 1164 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 HPS3Q969F9 1004 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 PLAGL2Q9UPG8 496 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 TRAF3IP3Q9Y228 551 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 MRFAP1Q9Y605 127 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 MEIS1O00470 390 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 PSMD10O75832 226 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 STAT3P40763 770 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 HSD17B4P51659 736 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 EPHA7Q15375 998 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 SPA17Q15506 151 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 KIAA1755Q5JYT7 1200 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 CATSPERGQ6ZRH7 1159 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 HSD17B14Q9BPX1 270 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 PAGR1Q9BTK6 254 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 TEKT3Q9BXF9 490 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 METTL14Q9HCE5 456 aaKnown RBP21.53■■□□□ 1.04
SPNS2-203ENST00000570979 CCPG1Q9ULG6 757 aa21.53■■□□□ 1.04
SPNS2-203ENST00000570979 CNMDO75829 334 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 CBX1P83916 185 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 ZNF569Q5MCW4 686 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 GPRC5AQ8NFJ5 357 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 SYN2Q92777 582 aaPredicted RBP21.52■■□□□ 1.04
SPNS2-203ENST00000570979 GJA10Q969M2 543 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 WDR24Q96S15 920 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 UNC93B1Q9H1C4 597 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 LUC7LQ9NQ29 371 aaKnown RBP21.52■■□□□ 1.04
SPNS2-203ENST00000570979 OLFML3Q9NRN5 406 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 TMEM51Q9NW97 253 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 UBE4BO95155 1302 aa21.52■■□□□ 1.04
SPNS2-203ENST00000570979 INHAP05111 366 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 ERVK-9P63128 1117 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 KNOP1Q1ED39 458 aaKnown RBP21.51■■□□□ 1.03
SPNS2-203ENST00000570979 BMT2Q1RMZ1 405 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 ARSHQ5FYA8 562 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 FRMD5Q7Z6J6 570 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 PXYLP1Q8TE99 480 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 CCDC42Q96M95 316 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 NAPGQ99747 312 aaPredicted RBP21.51■■□□□ 1.03
SPNS2-203ENST00000570979 ZNF577Q9BSK1 485 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 TANGO6Q9C0B7 1094 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 PORCNQ9H237 461 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 SIK3Q9Y2K2 1263 aa21.51■■□□□ 1.03
SPNS2-203ENST00000570979 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.51■■□□□ 1.03
SPNS2-203ENST00000570979 EIF3DO15371 548 aaKnown RBP eCLIP21.51■■□□□ 1.03
SPNS2-203ENST00000570979 USO1O60763 962 aaKnown RBP21.51■■□□□ 1.03
SPNS2-203ENST00000570979 ZBED4O75132 1171 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms