RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ZNF668Q96K58 619 aaPredicted RBP9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 FTHL17Q9BXU8 183 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 LMAN2LQ9H0V9 348 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 COL4A6Q14031 1691 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 PIEZO1Q92508 2521 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 IGLV3-22A0A075B6J6 115 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 IGKV6D-21A0A0A0MT36 114 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 IPO5O00410 1097 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 MBTPS2O43462 519 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 CDC45O75419 566 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 RPS6KA5O75582 802 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 VTNP04004 478 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 ALADP13716 330 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 NRIP1P48552 1158 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 NDUFV1P49821 464 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 KRT32Q14532 448 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 PFKFB3Q16875 520 aaPredicted RBP9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 KIZQ2M2Z5 673 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 CTC1Q2NKJ3 1217 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 TSGA10IPQ3SY00 556 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 PRR16Q569H4 304 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 FAM102BQ5T8I3 360 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 NME8Q8N427 588 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 MICAL1Q8TDZ2 1067 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 POF1BQ8WVV4 589 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 BRF1Q92994 677 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 JAKMIP1Q96N16 626 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 OSMRQ99650 979 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 ADAM2Q99965 735 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 ZNF577Q9BSK1 485 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 PLVAPQ9BX97 442 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 ERVK-5Q9HDB9 667 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 ST3GAL5Q9UNP4 418 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 FAM50BQ9Y247 325 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 PCDHB7Q9Y5E2 793 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 SQORQ9Y6N5 450 aa9.78□□□□□ -0.84
CTDNEP1-203ENST00000570385 DENND3A2RUS2 1198 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 TBKBP1A7MCY6 615 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 ZBTB42B2RXF5 422 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 hCG_1984214I3L0E3 225 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 PER2O15055 1255 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 DCXO43602 365 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 NCK2O43639 380 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 RPLP2P05387 115 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 FGFR1P11362 822 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 SARSP49591 514 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 SLC26A2P50443 739 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 RBM10P98175 930 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 ADAM15Q13444 863 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 PKN1Q16512 942 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 CSPP1Q1MSJ5 1256 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 CENPQQ7L2Z9 268 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 NIPA1Q7RTP0 329 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 ADHFE1Q8IWW8 467 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 ZNF713Q8N859 430 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 GJA10Q969M2 543 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 GLT8D2Q9H1C3 349 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 C6orf50Q9HD87 102 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 GABBR1Q9UBS5 961 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 TCEAL9Q9UHQ7 104 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 MUTYHQ9UIF7 546 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 CD207Q9UJ71 328 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 SAMM50Q9Y512 469 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 MYH9P35579 1960 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 KDM3AQ9Y4C1 1321 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 KIAA1671Q9BY89 1806 aa9.77□□□□□ -0.85
CTDNEP1-203ENST00000570385 CCDC196A0A1B0GTZ2 297 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 PRR33A8MZF0 331 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 CHMP2AO43633 222 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 C22orf31O95567 290 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 CYP3A4P08684 503 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 HMGB1P09429 215 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 CLCN3P51790 818 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 CCT2P78371 535 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 SMAD4Q13485 552 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 SMAD2Q15796 467 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 ZNF484Q5JVG2 852 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 BLOC1S2Q6QNY1 142 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 SLC24A5Q71RS6 500 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 LRRC71Q8N4P6 559 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 CRYGNQ8WXF5 182 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 P2RX5Q93086 422 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 SLC26A6Q9BXS9 759 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 ZMYND12Q9H0C1 365 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 NCOA5Q9HCD5 579 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 TYW1Q9NV66 732 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 CLEC1BQ9P126 229 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 VPS54Q9P1Q0 977 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 PRKAG3Q9UGI9 489 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 BARX2Q9UMQ3 279 aaPredicted RBP9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 AKT3Q9Y243 479 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 MAFBQ9Y5Q3 323 aaPredicted RBP9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 SNX14Q9Y5W7 946 aa9.76□□□□□ -0.85
CTDNEP1-203ENST00000570385 COL1A2P08123 1366 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 TECTAO75443 2155 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 ESYT2A0FGR8 921 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 C9IYK1 514 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms