RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ERAP1Q9NZ08 941 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 DDX20Q9UHI6 824 aaKnown RBP17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 TUBE1Q9UJT0 475 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 TRPC6Q9Y210 931 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 NPHP3-ACAD11A0A0J9YXS1 232 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 MYL3P08590 195 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 IDEP14735 1019 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 GJA9P57773 515 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 ZNF445P59923 1031 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 IRX5P78411 483 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 CACNB1Q02641 598 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 RAD51AP2Q09MP3 1159 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 PLCB4Q15147 1175 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 MTERF2Q49AM1 385 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 ARSHQ5FYA8 562 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 RINT1Q6NUQ1 792 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 CCDC47Q96A33 483 aaKnown RBP17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 SH2D3AQ9BRG2 576 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 HMX1Q9NP08 348 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 CYP26B1Q9NR63 512 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 EXOC1Q9NV70 894 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 KCND2Q9NZV8 630 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 MAN1B1Q9UKM7 699 aa17.14■□□□□ 0.33
HERPUD1-219ENST00000570273 MYADML2A6NDP7 307 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 TBCAO75347 108 aaKnown RBP17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 PGK1P00558 417 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 CCDC192P0DO97 292 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 TYRO3Q06418 890 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 SLC9C1Q4G0N8 1177 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 NT5DC1Q5TFE4 455 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 CNNM4Q6P4Q7 775 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 UNC13DQ70J99 1090 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 SPATA20Q8TB22 786 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 BBXQ8WY36 941 aaPredicted RBP17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 DNAJC19Q96DA6 116 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 GSDMAQ96QA5 445 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 REEP2Q9BRK0 252 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 C16orf70Q9BSU1 422 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 RMND1Q9NWS8 449 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 KLRC4O43908 158 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 MSCO60682 206 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 SARSP49591 514 aaKnown RBP17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 STX1AQ16623 288 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 ISM2Q6H9L7 571 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 LRSAM1Q6UWE0 723 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 C1orf186Q6ZWK4 172 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 CCDC65Q8IXS2 484 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 NIFKQ9BYG3 293 aaKnown RBP17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 ZHX3Q9H4I2 956 aa17.13■□□□□ 0.33
HERPUD1-219ENST00000570273 LOXHD1Q8IVV2 1947 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 PVALEFA0A1B0GWK0 134 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 H3BRB1 525 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 ZEB2O60315 1214 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 HBP1O60381 514 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 ADAMTS4O75173 837 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 GUCY2CP25092 1073 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 GIT2Q14161 759 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 KMT5BQ4FZB7 885 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 TRIML1Q8N9V2 468 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 FUCA2Q9BTY2 467 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.12■□□□□ 0.338e-7■■■■□ 22.8
HERPUD1-219ENST00000570273 TSPY26PQ9H489 355 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 TUT1Q9H6E5 874 aaKnown RBP17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 ATP6V0A4Q9HBG4 840 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 PANK4Q9NVE7 773 aa17.12■□□□□ 0.33
HERPUD1-219ENST00000570273 KPNA6O60684 536 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 HIP1RO75146 1068 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 DGAT1O75907 488 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 FAM13AO94988 1023 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 F2P00734 622 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 POLGP54098 1239 aaPredicted RBP17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 NLRP12P59046 1061 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 CHMP4BP1P59074 171 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 COASYQ13057 564 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 MORC3Q14149 939 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 KCNB1Q14721 858 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 GNASQ5JWF2 1037 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 MAEAQ7L5Y9 396 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 TIPINQ9BVW5 301 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 RNPEPQ9H4A4 650 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 ANO10Q9NW15 660 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 ODF2LQ9ULJ1 636 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 PPME1Q9Y570 386 aa17.11■□□□□ 0.33
HERPUD1-219ENST00000570273 WDR81Q562E7 1941 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 RSPH10B2B2RC85 870 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 RHOBTB3O94955 611 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 RSPH10BP0C881 870 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 RFC5P40937 340 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 PSEN2P49810 448 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 NKX3-2P78367 333 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 PURAQ00577 322 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 MFSD10Q14728 455 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 EMC2Q15006 297 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 TARBP2Q15633 366 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 PKN2Q16513 984 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 KAT2BQ92831 832 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 KATNAL1Q9BW62 490 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 MCOLN1Q9GZU1 580 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms