RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PHF20Q9BVI0 1012 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 ASPNQ9BXN1 380 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 TMPRSS13Q9BYE2 586 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 NGRNQ9NPE2 291 aaKnown RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 NLRC4Q9NPP4 1024 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 GPR27Q9NS67 375 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 C14orf119Q9NWQ9 140 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 MAP3K20Q9NYL2 800 aaKnown RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PLA2G2EQ9NZK7 142 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 RNF181Q9P0P0 153 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 LUZP4Q9P127 313 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 SRP68Q9UHB9 627 aaKnown RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 LZTS1Q9Y250 596 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PTPN22Q9Y2R2 807 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 GPR55Q9Y2T6 319 aaPredicted RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 COQ6Q9Y2Z9 468 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PCDHGA9Q9Y5G4 932 aaKnown RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PCDHGA8Q9Y5G5 932 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PCDHGA7Q9Y5G6 932 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PCDHGA6Q9Y5G7 932 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PCDHGA3Q9Y5H0 932 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 PCDHGA2Q9Y5H1 932 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 MRC1P22897 1456 aa3.9□□□□□ -1.79
CNOT1-221ENST00000569924 SOS1Q07889 1333 aaPredicted RBP3.9□□□□□ -1.79
CNOT1-221ENST00000569924 DLEC1Q9Y238 1755 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 PTPDC1A2A3K4 754 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 CDC14CA4D256 554 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 KRBA1A5PL33 1030 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 MEGF11A6BM72 1044 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 DLL1O00548 723 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 WNT9AO14904 365 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 CTNND1O60716 968 aaKnown RBP3.89□□□□□ -1.79
CNOT1-221ENST00000569924 LRIG2O94898 1065 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 ALBP02768 609 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 SOD2P04179 222 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 COL6A1P12109 1028 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 TYRP1P17643 537 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 CHRNA5P30532 468 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 MAN1A1P33908 653 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 IL13P35225 146 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 MAP2K3P46734 347 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 PPM1FP49593 454 aaPredicted RBP3.89□□□□□ -1.79
CNOT1-221ENST00000569924 USP14P54578 494 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 HTRA3P83110 453 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 SCRN1Q12765 414 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 CHAF1AQ13111 956 aaPredicted RBP3.89□□□□□ -1.79
CNOT1-221ENST00000569924 LRRC32Q14392 662 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 TESK1Q15569 626 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 ARHGAP44Q17R89 818 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 RRP12Q5JTH9 1297 aaKnown RBP3.89□□□□□ -1.79
CNOT1-221ENST00000569924 BROXQ5VW32 411 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 SULT6B1Q6IMI4 303 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 CCDC70Q6NSX1 233 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 C1orf228Q6PIY5 440 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 LBX2Q6XYB7 198 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 OVCH1Q7RTY7 1134 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 PPIL6Q8IXY8 311 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 FAM186BQ8IYM0 893 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 EFHBQ8N7U6 833 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 VPS37AQ8NEZ2 397 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 NPLOC4Q8TAT6 608 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 FRS2Q8WU20 508 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 RNF141Q8WVD5 230 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 NANOS1Q8WY41 292 aaKnown RBP3.89□□□□□ -1.79
CNOT1-221ENST00000569924 DIO2Q92813 273 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 COPS5Q92905 334 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 ZDHHC15Q96MV8 337 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 NAA15Q9BXJ9 866 aaKnown RBP3.89□□□□□ -1.79
CNOT1-221ENST00000569924 PRDM14Q9GZV8 571 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 GSX1Q9H4S2 264 aaPredicted RBP3.89□□□□□ -1.79
CNOT1-221ENST00000569924 PANK3Q9H999 370 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 RRAGCQ9HB90 399 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 NARFQ9UHQ1 456 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 RNF112Q9ULX5 631 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 NSFL1CQ9UNZ2 370 aaKnown RBP3.89□□□□□ -1.79
CNOT1-221ENST00000569924 COL15A1P39059 1388 aa3.89□□□□□ -1.79
CNOT1-221ENST00000569924 AFDNP55196 1824 aaKnown RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 GLTPD2A6NH11 291 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 GSTA4O15217 222 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 MEFVO15553 781 aaPredicted RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 RNMTO43148 476 aaKnown RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 TGM5O43548 720 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 XPOTO43592 962 aaKnown RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 AP1G1O43747 822 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 PIP5K1CO60331 668 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 RNGTTO60942 597 aaKnown RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 OFD1O75665 1012 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 ZRANB2O95218 330 aaKnown RBP eCLIP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 THBDP07204 575 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 SRGAP2CP0DJJ0 459 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 SETSIPP0DME0 302 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 CYP19A1P11511 503 aaPredicted RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 VEGFAP15692 232 aaPredicted RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 RHCEP18577 417 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 LTBRP36941 435 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 ETV3P41162 512 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 SCAND1P57086 179 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 POU4F1Q01851 419 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 RHDQ02161 417 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 STK3Q13188 491 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms