RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 LINC01465Q8N7H1 131 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 SEPT8Q92599 483 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 CEP89Q96ST8 783 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 SLC9A7Q96T83 725 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 TMEM60Q9H2L4 133 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 TTYH1Q9H313 450 aaPredicted RBP12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 TTC12Q9H892 705 aaPredicted RBP12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 MTMR10Q9NXD2 777 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 SMC3Q9UQE7 1217 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 CDY2AQ9Y6F7 541 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 SQORQ9Y6N5 450 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 COL6A3P12111 3177 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 P4HBP07237 508 aaKnown RBP12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 ATP2B1P20020 1258 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 MCM7P33993 719 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 QARSP47897 775 aaKnown RBP12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 TOB1P50616 345 aaPredicted RBP12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 GNL2Q13823 731 aaKnown RBP12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 LPIN1Q14693 890 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 NCAPH2Q6IBW4 605 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 ANO5Q75V66 913 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 HERC6Q8IVU3 1022 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 BANK1Q8NDB2 785 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 APBB2Q92870 758 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 TIFAQ96CG3 184 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 IFIH1Q9BYX4 1025 aaKnown RBP12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 CELF4Q9BZC1 486 aaKnown RBP12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 SEMA6BQ9H3T3 888 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 WRAP73Q9P2S5 460 aaPredicted RBP12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 PCDHA11Q9Y5I1 949 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 TRPV2Q9Y5S1 764 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 SIP14410 1827 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 EVPLQ92817 2033 aa12.44□□□□□ -0.42
SHCBP1-207ENST00000569702 IGKV6-21A0A0C4DH24 114 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 DKC1O60832 514 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 SLITRK3O94933 977 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 GHRP10912 638 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 TXKP42681 527 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 KCNJ6P48051 423 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 RABGGTBP53611 331 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 DEFB103AP81534 67 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 TMEM62Q0P6H9 643 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 ZNF174Q15697 407 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 RAB30Q15771 203 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 TTC38Q5R3I4 469 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 TSHZ1Q6ZSZ6 1077 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 C4orf19Q8IY42 314 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 METTL13Q8N6R0 699 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 C4orf32Q8N8J7 132 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 USP38Q8NB14 1042 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 HSD17B14Q9BPX1 270 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 AGO3Q9H9G7 860 aaKnown RBP12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 RGL1Q9NZL6 768 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 MSRAQ9UJ68 235 aa12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 NOL7Q9UMY1 257 aaKnown RBP12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 YBX2Q9Y2T7 364 aaKnown RBP12.43□□□□□ -0.42
SHCBP1-207ENST00000569702 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 TMEM150BA6NC51 233 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 M0QZ92 97 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 GPR32O75388 356 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 LYPLA2O95372 231 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 CLCN3P51790 818 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 TBC1D8BQ0IIM8 1120 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 MTERF2Q49AM1 385 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 LARP1BQ659C4 914 aaKnown RBP12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 EFCAB12Q6NXP0 572 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 SNX21Q969T3 373 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 INTS4Q96HW7 963 aaKnown RBP12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 DYDC2Q96IM9 177 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 GUCD1Q96NT3 240 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 EIF2AK1Q9BQI3 630 aaKnown RBP12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 LXNQ9BS40 222 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 ZSWIM4Q9H7M6 989 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 CDHR5Q9HBB8 845 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 SEPT9Q9UHD8 586 aaPredicted RBP12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 PTPRSQ13332 1948 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 MICAL3Q7RTP6 2002 aa12.42□□□□□ -0.42
SHCBP1-207ENST00000569702 H3BQV1 296 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 K7ELQ4 463 aaPredicted RBP12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 MAFO75444 373 aaPredicted RBP12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 GJB5O95377 273 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 VTNP04004 478 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 OR52Z1P0C646 297 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 MYOGP15173 224 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 TMOD1P28289 359 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 CD52P31358 61 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 CTTNQ14247 550 aaKnown RBP12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 NBR1Q14596 966 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 MCTP1Q6DN14 999 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 FAM43BQ6ZT52 329 aaPredicted RBP12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 TMCO2Q7Z6W1 182 aaPredicted RBP12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 ZNF710Q8N1W2 664 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 LRRC71Q8N4P6 559 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 NEK9Q8TD19 979 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 GBF1Q92538 1859 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 FAM161BQ96MY7 647 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms