RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 WNT7AO00755 349 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 NEMFO60524 1076 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 DKC1O60832 514 aaKnown RBP eCLIP15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 P4HBP07237 508 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 U2AF2P26368 475 aaKnown RBP eCLIP15.53■□□□□ 0.087e-8■■□□□ 12.3
HERPUD1-218ENST00000569569 PSMC5P62195 406 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 MRPS6P82932 125 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 EPHA7Q15375 998 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 TCTN1Q2MV58 587 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 XKR3Q5GH77 459 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 APBB2Q92870 758 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 TIFAQ96CG3 184 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 OSBPL7Q9BZF2 842 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 SEMA6BQ9H3T3 888 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 MTMR10Q9NXD2 777 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 SQORQ9Y6N5 450 aa15.53■□□□□ 0.08
HERPUD1-218ENST00000569569 C22orf31O95567 290 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 MCM7P33993 719 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 PBX2P40425 430 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 QARSP47897 775 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 TRAPPC10P48553 1259 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 WDR5P61964 334 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 TMEM62Q0P6H9 643 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 ORC2Q13416 577 aaPredicted RBP15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 KIAA0319LQ8IZA0 1049 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 BANK1Q8NDB2 785 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 MTMR9Q96QG7 549 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 NIFKQ9BYG3 293 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 IFIH1Q9BYX4 1025 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 CELF4Q9BZC1 486 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 TTC12Q9H892 705 aaPredicted RBP15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 NOL7Q9UMY1 257 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 PCDHA11Q9Y5I1 949 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 TRPV2Q9Y5S1 764 aa15.52■□□□□ 0.08
HERPUD1-218ENST00000569569 KDM3AQ9Y4C1 1321 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 KIF28PB7ZC32 967 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 STBD1O95210 358 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 GHRP10912 638 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 TMOD1P28289 359 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 TXKP42681 527 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 RABGGTBP53611 331 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 SPIRE1Q08AE8 756 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 CUL4AQ13619 759 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 TARBP2Q15633 366 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 ZNF174Q15697 407 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 FBXO47Q5MNV8 452 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 NCAPH2Q6IBW4 605 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 EFCAB12Q6NXP0 572 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 METTL13Q8N6R0 699 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 USP38Q8NB14 1042 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 TTYH1Q9H313 450 aaPredicted RBP15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 SEPT9Q9UHD8 586 aaPredicted RBP15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 TTC3P53804 2025 aa15.51■□□□□ 0.07
HERPUD1-218ENST00000569569 ARID2Q68CP9 1835 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 DDX11L8A8MPP1 907 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 H3BQV1 296 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 DEFB103AP81534 67 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 TBC1D8BQ0IIM8 1120 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 LPIN1Q14693 890 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 TTC38Q5R3I4 469 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 TSHZ1Q6ZSZ6 1077 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 HERC6Q8IVU3 1022 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 FAM161BQ96MY7 647 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 TMEM60Q9H2L4 133 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 ZNF576Q9H609 170 aa15.5■□□□□ 0.07
HERPUD1-218ENST00000569569 AMHP03971 560 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 MTERF2Q49AM1 385 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 LARP1BQ659C4 914 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 MCTP1Q6DN14 999 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 ANO5Q75V66 913 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 C4orf19Q8IY42 314 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 ZNF710Q8N1W2 664 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 LINC01465Q8N7H1 131 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 DYDC2Q96IM9 177 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 LXNQ9BS40 222 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 NKX2-4Q9H2Z4 354 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 ZSWIM4Q9H7M6 989 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 SUGCTQ9HAC7 445 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 SLC28A3Q9HAS3 691 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 RGL1Q9NZL6 768 aa15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 YBX2Q9Y2T7 364 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-218ENST00000569569 RBAK-RBAKDNI3L0D1 243 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 SLITRK3O94933 977 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 CLCN3P51790 818 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 CTTNQ14247 550 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 OTUD6AQ7L8S5 288 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 LRRC71Q8N4P6 559 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 NEK9Q8TD19 979 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 CEP89Q96ST8 783 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 MAP7D2Q96T17 732 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 HSD17B14Q9BPX1 270 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 EIF2AK1Q9BQI3 630 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 ZBED2Q9BTP6 218 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 AGO3Q9H9G7 860 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 AKT3Q9Y243 479 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 GINS2Q9Y248 185 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 PPME1Q9Y570 386 aa15.48■□□□□ 0.07
HERPUD1-218ENST00000569569 IGKV6-21A0A0C4DH24 114 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms