RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 LSM11P83369 360 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH13-213ENST00000569454 ITIH3Q06033 890 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 GABPB1Q06547 395 aaPredicted RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 CXCL9Q07325 125 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 GPS2Q13227 327 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 PABPC4Q13310 644 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH13-213ENST00000569454 ADAM9Q13443 819 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 GIT2Q14161 759 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 MAP9Q49MG5 647 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 TEX35Q5T0J7 233 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 PAPD7Q5XG87 772 aaKnown RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 PDXDC1Q6P996 788 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 HS2ST1Q7LGA3 356 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 VPS36Q86VN1 386 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 LDHDQ86WU2 507 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 SPICE1Q8N0Z3 855 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 SLC35F6Q8N357 371 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 RNF10Q8N5U6 811 aaKnown RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 MSANTD4Q8NCY6 345 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 RDM1Q8NG50 284 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 ACER1Q8TDN7 264 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 TMEM174Q8WUU8 243 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 SCFD1Q8WVM8 642 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 HNRNPLLQ8WVV9 542 aaKnown RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 SECISBP2LQ93073 1101 aaKnown RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 VTI1AQ96AJ9 217 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 IWS1Q96ST2 819 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 CHP1Q99653 195 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 HSD17B14Q9BPX1 270 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 REEP2Q9BRK0 252 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 ZMYND15Q9H091 742 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 BHMT2Q9H2M3 363 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 PARVGQ9HBI0 331 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 AS3MTQ9HBK9 375 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 FAM207AQ9NSI2 230 aaPredicted RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 TBC1D22BQ9NU19 505 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 CCPG1Q9ULG6 757 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 GUCA1BQ9UMX6 200 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 JRKLQ9Y4A0 524 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 CTDP1Q9Y5B0 961 aaPredicted RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 PPP2R3BQ9Y5P8 575 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 SAR1BQ9Y6B6 198 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 RBBP6Q7Z6E9 1792 aaKnown RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 COL4A5P29400 1685 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 SHTN1A0MZ66 631 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 LRRC53A6NM62 1247 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 RNF225M0QZC1 329 aaPredicted RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 IPO5O00410 1097 aaKnown RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 LYPLA2O95372 231 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 AFPP02771 609 aaKnown RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 CCDC172P0C7W6 258 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 PRLRP16471 622 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 TCP1P17987 556 aaKnown RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 KCNA3P22001 575 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 SCP2P22307 547 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 HOXA13P31271 388 aaPredicted RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 STAT3P40763 770 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 JAK3P52333 1124 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 HERVK_113P62684 666 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 JAG1P78504 1218 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 AMPD2Q01433 879 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 KCTD2Q14681 263 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 RRP1BQ14684 758 aaKnown RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 PPP2R5AQ15172 486 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 IFI16Q16666 785 aaKnown RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 SHROOM1Q2M3G4 852 aaPredicted RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 FER1L6Q2WGJ9 1857 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 ARSHQ5FYA8 562 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 SFMBT2Q5VUG0 894 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 PCNX4Q63HM2 1172 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 B3GNT9Q6UX72 402 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 OTOP1Q7RTM1 612 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 TRAPPC11Q7Z392 1133 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 SFR1Q86XK3 245 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 APOBEC3FQ8IUX4 373 aaKnown RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 BAP1Q92560 729 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 HPS3Q969F9 1004 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 MXRA8Q9BRK3 442 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 ZNF577Q9BSK1 485 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 WDR18Q9BV38 432 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 ZNF341Q9BYN7 854 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 TMEM39BQ9GZU3 492 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 MTFR1LQ9H019 292 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 ACBD3Q9H3P7 528 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 ZHX3Q9H4I2 956 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 SLC38A10Q9HBR0 1119 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 AGPAT5Q9NUQ2 364 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 AIPL1Q9NZN9 384 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 LARSQ9P2J5 1176 aaKnown RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 RNF14Q9UBS8 474 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.29□□□□□ -1.4
CDH13-213ENST00000569454 PGAP2Q9UHJ9 254 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 DBR1Q9UK59 544 aaKnown RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 RAB21Q9UL25 225 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 REXO2Q9Y3B8 237 aaKnown RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 V9GYY5 206 aaPredicted RBP6.29□□□□□ -1.4
CDH13-213ENST00000569454 ATAD5Q96QE3 1844 aa6.29□□□□□ -1.4
CDH13-213ENST00000569454 MYPNQ86TC9 1320 aa6.28□□□□□ -1.4
CDH13-213ENST00000569454 TARSL2A2RTX5 802 aaKnown RBP6.28□□□□□ -1.4
CDH13-213ENST00000569454 ARHGEF35A5YM69 484 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms