RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	SP2	Q02086	613 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	NONO	Q15233	471 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	SPOUT1	Q5T280	376 aa	Known RBP	7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	LAIR1	Q6GTX8	287 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	TAF2	Q6P1X5	1199 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	DCLRE1A	Q6PJP8	1040 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	PRR23C	Q6ZRP0	262 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	CCDC149	Q6ZUS6	474 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	TMC7	Q7Z402	723 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	AACS	Q86V21	672 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	KRI1	Q8N9T8	703 aa	Known RBP	7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	DCAF4	Q8WV16	495 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	LMBR1	Q8WVP7	490 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	TBC1D5	Q92609	795 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	ARHGAP45	Q92619	1136 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	NXPE3	Q969Y0	559 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	DDX23	Q9BUQ8	820 aa	Known RBP	7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	SLC2A4RG	Q9NR83	387 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	SQOR	Q9Y6N5	450 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	SMG1	Q96Q15	3661 aa	Known RBP	7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	GCN1	Q92616	2671 aa	Known RBP	7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	NRCAM	Q92823	1304 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	TBKBP1	A7MCY6	615 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	FOXD2	O60548	495 aa	Predicted RBP	7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	ZMYND10	O75800	440 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	GGPS1	O95749	300 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	NR3C2	P08235	984 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	LAG3	P18627	525 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	SARS	P49591	514 aa	Known RBP	7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	ARHGAP4	P98171	946 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	SMC1A	Q14683	1233 aa	Known RBP	7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	LETM2	Q2VYF4	491 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	FAM102B	Q5T8I3	360 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	KCNV1	Q6PIU1	500 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	TMC5	Q6UXY8	1006 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	LURAP1L	Q8IV03	231 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	CELF5	Q8N6W0	485 aa	Known RBP	7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	SLC22A17	Q8WUG5	538 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	GATA6	Q92908	595 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	ZDHHC16	Q969W1	377 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	RMDN3	Q96TC7	470 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	DNAJC2	Q99543	621 aa	Known RBP	7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	USP26	Q9BXU7	913 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	FAM126A	Q9BYI3	521 aa	Predicted RBP	7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	KRTAP3-3	Q9BYR6	98 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	KRTAP3-2	Q9BYR7	98 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	BCO2	Q9BYV7	579 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	OSBPL6	Q9BZF3	934 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	TMX1	Q9H3N1	280 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	IL17RB	Q9NRM6	502 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	RXFP3	Q9NSD7	469 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	EPS15L1	Q9UBC2	864 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	DACH1	Q9UI36	760 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	LRFN2	Q9ULH4	789 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	PADI3	Q9ULW8	664 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	PCDHB7	Q9Y5E2	793 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	CDY2A	Q9Y6F7	541 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	LCT	P09848	1927 aa		7.29	□□□□□ -1.24
BBS4-218	ENST00000569440	NLRC5	Q86WI3	1866 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	KANSL1L	A0AUZ9	987 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	SORBS3	O60504	671 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	KCNK5	O95279	499 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	TGFB3	P10600	412 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	EPCAM	P16422	314 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	UBA1	P22314	1058 aa	Known RBP	7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	KRT17	Q04695	432 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	PTPN14	Q15678	1187 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	IL31	Q6EBC2	164 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	TYW1B	Q6NUM6	668 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	FAM43B	Q6ZT52	329 aa	Predicted RBP	7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	RSPH3	Q86UC2	560 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	SHD	Q96IW2	340 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	ADAM33	Q9BZ11	813 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	7.28	□□□□□ -1.24	2e-8	■■■■□ 21.2
BBS4-218	ENST00000569440	BCAS3	Q9H6U6	928 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	PRMT8	Q9NR22	394 aa	Predicted RBP	7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	PAG1	Q9NWQ8	432 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	ANKFY1	Q9P2R3	1169 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	STX8	Q9UNK0	236 aa		7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	MTF2	Q9Y483	593 aa	Predicted RBP	7.28	□□□□□ -1.24
BBS4-218	ENST00000569440	MBLAC1	A4D2B0	266 aa	Predicted RBP	7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	ANHX	E9PGG2	379 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	ARHGAP33	O14559	1287 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	NMT2	O60551	498 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	CXCL14	O95715	111 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	TDGF1	P13385	188 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	EIF2AK2	P19525	551 aa	Known RBP	7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	MLLT3	P42568	568 aa	Predicted RBP	7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	MAGEA9	P43362	315 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	MRPS6	P82932	125 aa	Known RBP	7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	SLFN5	Q08AF3	891 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	LPAL2	Q16609	132 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	CCDC96	Q2M329	555 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	MARCH8	Q5T0T0	291 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	ARHGEF16	Q5VV41	709 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	TSSK4	Q6SA08	328 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	KCNT2	Q6UVM3	1135 aa		7.27	□□□□□ -1.25
BBS4-218	ENST00000569440	C15orf39	Q6ZRI6	1047 aa		7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms