RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 HYOU1Q9Y4L1 999 aa9.6□□□□□ -0.87
LINC00558-201ENST00000569422 SAMM50Q9Y512 469 aa9.6□□□□□ -0.87
LINC00558-201ENST00000569422 GCOM1H8Y6P7 765 aaPredicted RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 GNA14O95837 355 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 FOSP01100 380 aaPredicted RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 NR3C1P04150 777 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 POLR2MP0CAP2 368 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 ARP10275 920 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 SSR1P43307 286 aaKnown RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 PTK2Q05397 1052 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 KLHDC7AQ5VTJ3 777 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 GMCL1P1Q8NEA9 526 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 IFT81Q8WYA0 676 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 GMCL1Q96IK5 515 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 TLR10Q9BXR5 811 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 RABEP2Q9H5N1 569 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 SLC24A3Q9HC58 644 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 ABCB11O95342 1321 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 ANKRD62A6NC57 917 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 ZSCAN5CA6NGD5 496 aaPredicted RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 AFPP02771 609 aaKnown RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 CAPN2P17655 700 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 Q4G0T1 1027 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 RINT1Q6NUQ1 792 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 AGBL1Q96MI9 1066 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 FAM20AQ96MK3 541 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 SELENOOQ9BVL4 669 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 RBM12Q9NTZ6 932 aaKnown RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 PPP1R1BQ9UD71 204 aaPredicted RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 PLSCR1O15162 318 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 CALUO43852 315 aaPredicted RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 SLITRK3O94933 977 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 KIF4AO95239 1232 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 TRIM49P0CI25 452 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 TRIM49CP0CI26 452 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 UCHL3P15374 230 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 TUBB4BP68371 445 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 ASTE1Q2TB18 679 aaPredicted RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 MAP9Q49MG5 647 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 DNAJC21Q5F1R6 531 aaKnown RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 IQCEQ6IPM2 695 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 WDR93Q6P2C0 686 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 FLAD1Q8NFF5 587 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 CXorf38Q8TB03 319 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 ZNF577Q9BSK1 485 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 GCNT4Q9P109 453 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 ZNF70Q9UC06 446 aaPredicted RBP9.59□□□□□ -0.87
LINC00558-201ENST00000569422 VAV3Q9UKW4 847 aa9.59□□□□□ -0.87
LINC00558-201ENST00000569422 SHTN1A0MZ66 631 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 CCDC66A2RUB6 948 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 RNF40O75150 1001 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 GFPT2O94808 682 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 EPB41P11171 864 aaKnown RBP9.58□□□□□ -0.88
LINC00558-201ENST00000569422 GGCXP38435 758 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 CCNI2Q6ZMN8 369 aaPredicted RBP9.58□□□□□ -0.88
LINC00558-201ENST00000569422 ZNF571Q7Z3V5 609 aaPredicted RBP9.58□□□□□ -0.88
LINC00558-201ENST00000569422 KLHL7Q8IXQ5 586 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 CRYGNQ8WXF5 182 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 IQCDQ96DY2 449 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 PCIF1Q9H4Z3 704 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 FAM204AQ9H8W3 233 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 WRAP73Q9P2S5 460 aaPredicted RBP9.58□□□□□ -0.88
LINC00558-201ENST00000569422 AJAP1Q9UKB5 411 aaPredicted RBP9.58□□□□□ -0.88
LINC00558-201ENST00000569422 PITPNM2Q9BZ72 1349 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 SSU72P8A0A1W2PR75 194 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 SPDYE2BA6NHP3 402 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 ENTPD3O75355 529 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 SPDYE6P0CI01 402 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 TCP1P17987 556 aaKnown RBP9.58□□□□□ -0.88
LINC00558-201ENST00000569422 PON1P27169 355 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 CALRP27797 417 aaKnown RBP9.58□□□□□ -0.88
LINC00558-201ENST00000569422 HDLBPQ00341 1268 aaKnown RBP9.58□□□□□ -0.88
LINC00558-201ENST00000569422 SLC18A3Q16572 532 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 ODR4Q5SWX8 454 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 STYK1Q6J9G0 422 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 C8orf74Q6P047 294 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 OTOP1Q7RTM1 612 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 SYCP3Q8IZU3 236 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 ACBD3Q9H3P7 528 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 GOPCQ9HD26 462 aa9.58□□□□□ -0.88
LINC00558-201ENST00000569422 TMEM150BA6NC51 233 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 KCNK3O14649 394 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 EYA4O95677 639 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 PAX3P23760 479 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 ARHGAP44Q17R89 818 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 FAM178BQ8IXR5 827 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 GOLGA6L1Q8N7Z2 621 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 RBM46Q8TBY0 533 aaKnown RBP9.57□□□□□ -0.88
LINC00558-201ENST00000569422 MBOAT7Q96N66 472 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 GANQ9H2C0 597 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 LUC7LQ9NQ29 371 aaKnown RBP9.57□□□□□ -0.88
LINC00558-201ENST00000569422 FAM184BQ9ULE4 1060 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 ASTN1O14525 1302 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 MYH7BA7E2Y1 1941 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 IGLV3-22A0A075B6J6 115 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 TISP43B9A030 160 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 SORBS3O60504 671 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 ABCB4P21439 1286 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 EDRF1Q3B7T1 1238 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 LDHDQ86WU2 507 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms