RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 RRP36Q96EU6 259 aaKnown RBP12.78□□□□□ -0.36
CHRFAM7A-206ENST00000569278 UIMC1Q96RL1 719 aa12.78□□□□□ -0.36
CHRFAM7A-206ENST00000569278 FAM49AQ9H0Q0 323 aaPredicted RBP12.78□□□□□ -0.36
CHRFAM7A-206ENST00000569278 ERAP1Q9NZ08 941 aa12.78□□□□□ -0.36
CHRFAM7A-206ENST00000569278 RBM8AQ9Y5S9 174 aaKnown RBP12.78□□□□□ -0.36
CHRFAM7A-206ENST00000569278 IGSF9BQ9UPX0 1349 aa12.78□□□□□ -0.36
CHRFAM7A-206ENST00000569278 ZDBF2Q9HCK1 2354 aa12.78□□□□□ -0.36
CHRFAM7A-206ENST00000569278 PDIA4P13667 645 aaKnown RBP12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 INSRRP14616 1297 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 SMARCA1P28370 1054 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 IGBP1P78318 339 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 MTMR1Q13613 665 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PLCB4Q15147 1175 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 NLRX1Q86UT6 975 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CMTR2Q8IYT2 770 aaKnown RBP12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 KLHL23Q8NBE8 558 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PRSS33Q8NF86 280 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 TMEM40Q8WWA1 233 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 P2RX5Q93086 422 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 KIF2CQ99661 725 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PLVAPQ9BX97 442 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 JADE2Q9NQC1 790 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CHMP5Q9NZZ3 219 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 RWDD3Q9Y3V2 267 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CNTNAP5Q8WYK1 1306 aa12.77□□□□□ -0.37
CHRFAM7A-206ENST00000569278 ERICH2A1L162 156 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 ZBTB42B2RXF5 422 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PRC1O43663 620 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PTMSP20962 102 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 FUT2Q10981 343 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PAN2Q504Q3 1202 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 TMTC3Q6ZXV5 915 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 NPAS4Q8IUM7 802 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PGBD1Q96JS3 809 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 IGFLR1Q9H665 355 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PSTPIP2Q9H939 334 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CD207Q9UJ71 328 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PADI3Q9ULW8 664 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 BARX2Q9UMQ3 279 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 TRPV2Q9Y5S1 764 aa12.76□□□□□ -0.37
CHRFAM7A-206ENST00000569278 LOC730098B7Z3J9 87 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 K7ELQ4 463 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 ADAMTS3O15072 1205 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 NCK2O43639 380 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CCNE2O96020 404 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 ARP10275 920 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 COASYQ13057 564 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CBX2Q14781 532 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 SART3Q15020 963 aaKnown RBP12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 TMEM266Q2M3C6 531 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 WDR81Q562E7 1941 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 WWC2Q6AWC2 1192 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 EFHBQ8N7U6 833 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 GIMAP8Q8ND71 665 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CTCFLQ8NI51 663 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 GLG1Q92896 1179 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CUL5Q93034 780 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 LRRC2Q9BYS8 371 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 SMARCAD1Q9H4L7 1026 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 ERVK-5Q9HDB9 667 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 KCNH7Q9NS40 1196 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PCDHA6Q9UN73 950 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 KDM3AQ9Y4C1 1321 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PCDHA8Q9Y5H6 950 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 PCDHA2Q9Y5H9 948 aa12.75□□□□□ -0.37
CHRFAM7A-206ENST00000569278 IGKV6D-21A0A0A0MT36 114 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 STXBP3O00186 592 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 SCG2P13521 617 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 KIF5BP33176 963 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 ACTR2P61160 394 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 KCNV2Q8TDN2 545 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 POF1BQ8WVV4 589 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CDHR1Q96JP9 859 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 MTA3Q9BTC8 594 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 SLC9A2Q9UBY0 812 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 SEC63Q9UGP8 760 aaKnown RBP12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 FAM50BQ9Y247 325 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 USP15Q9Y4E8 981 aaPredicted RBP12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 SQORQ9Y6N5 450 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 EVPLQ92817 2033 aa12.74□□□□□ -0.37
CHRFAM7A-206ENST00000569278 NFASCO94856 1347 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 DPYSL4O14531 572 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 FSCN2O14926 492 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 SLC27A2O14975 620 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 ATG7O95352 703 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 ATP4AP20648 1035 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 HSPA4P34932 840 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 LIFRP42702 1097 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 NRIP1P48552 1158 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 NDUFV1P49821 464 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 KCNC3Q14003 757 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 RSPH3Q86UC2 560 aa12.73□□□□□ -0.37
CHRFAM7A-206ENST00000569278 CCDC82Q8N4S0 544 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms