RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 GALNT17Q6IS24 598 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 NFRKBQ6P4R8 1299 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 SIX5Q8N196 739 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 CCDC148Q8NFR7 591 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 PPTC7Q8NI37 304 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 RNF217Q8TC41 542 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 FAM200AQ8TCP9 573 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 AFG1LQ8WV93 481 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 GPRASP2Q96D09 838 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 GDF15Q99988 308 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 HINFPQ9BQA5 517 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 SLC26A6Q9BXS9 759 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 UPF2Q9HAU5 1272 aaKnown RBP10.49□□□□□ -0.73
CAPN3-219ENST00000569136 RTEL1Q9NZ71 1219 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 ZNFX1Q9P2E3 1918 aaKnown RBP10.48□□□□□ -0.73
CAPN3-219ENST00000569136 SMCHD1A6NHR9 2005 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 ARIH2O95376 493 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 DEXIO95424 95 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 XBP1P17861 261 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 FAAP100Q0VG06 881 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 TMEM63BQ5T3F8 832 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 METTL7BQ6UX53 244 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 LYSMD3Q7Z3D4 306 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 WASF1Q92558 559 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 COPS5Q92905 334 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 SPATA33Q96N06 139 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 KATNAL1Q9BW62 490 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 C22orf23Q9BZE7 217 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 JADE2Q9NQC1 790 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 TPCN1Q9ULQ1 816 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 LAMA4Q16363 1823 aa10.48□□□□□ -0.73
CAPN3-219ENST00000569136 PARP14Q460N5 1801 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 TRIM43BA6NCK2 446 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 LGR5O75473 907 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 GGPS1O95749 300 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 TIMP1P01033 207 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 CYP3A4P08684 503 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 HOXD8P13378 290 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 RAG1P15918 1043 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 RHOQP17081 205 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 SYN1P17600 705 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 GPC1P35052 558 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 ZNF76P36508 570 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 MAGEA10P43363 369 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 SMTNP53814 917 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 SP2Q02086 613 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 UBE2SQ16763 222 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 C8orf34Q49A92 452 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 CEP55Q53EZ4 464 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 HABP4Q5JVS0 413 aaKnown RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 TSEN2Q8NCE0 465 aaKnown RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 IL31RAQ8NI17 732 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 PHKBQ93100 1093 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 TRIM43Q96BQ3 446 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 UBE2OQ9C0C9 1292 aaKnown RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 PRO3102Q9H379 93 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 NCOA5Q9HCD5 579 aaKnown RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 PRDM5Q9NQX1 630 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 UBIAD1Q9Y5Z9 338 aa10.47□□□□□ -0.73
CAPN3-219ENST00000569136 RBBP6Q7Z6E9 1792 aaKnown RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 TNRC18O15417 2968 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-219ENST00000569136 MEIS1O00470 390 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 NOP56O00567 594 aaKnown RBP10.46□□□□□ -0.73
CAPN3-219ENST00000569136 CD4P01730 458 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 MMP3P08254 477 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 SREBF1P36956 1147 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 USP11P51784 963 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 AK2P54819 239 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 NLRP5P59047 1200 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 STK3Q13188 491 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 MTMR1Q13613 665 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 NIPA1Q7RTP0 329 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 SESTD1Q86VW0 696 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 REXO1Q8N1G1 1221 aaKnown RBP10.46□□□□□ -0.73
CAPN3-219ENST00000569136 ZSCAN31Q96LW9 406 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-219ENST00000569136 MXRA8Q9BRK3 442 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 ANO3Q9BYT9 981 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 PDLIM7Q9NR12 457 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 LIMCH1Q9UPQ0 1083 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 GRIN2DO15399 1336 aa10.46□□□□□ -0.73
CAPN3-219ENST00000569136 COL11A1P12107 1806 aaPredicted RBP10.46□□□□□ -0.74
CAPN3-219ENST00000569136 TRIOBPQ9H2D6 2365 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 A6NJY4 79 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 ATG7O95352 703 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 ITGB5P18084 799 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 UBA1P22314 1058 aaKnown RBP10.45□□□□□ -0.74
CAPN3-219ENST00000569136 PHKA2P46019 1235 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 RBM25P49756 843 aaKnown RBP10.45□□□□□ -0.74
CAPN3-219ENST00000569136 SCRN1Q12765 414 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 POU4F2Q12837 409 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 JAKMIP3Q5VZ66 844 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 MFSD5Q6N075 450 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 CYFIP1Q7L576 1253 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 FAM126BQ8IXS8 530 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 TMEM199Q8N511 208 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 C7orf31Q8N865 590 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 SEPT1Q8WYJ6 367 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 TNPO1Q92973 898 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms