RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 FAM161BQ96MY7 647 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 SUN2Q9UH99 717 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 SYNMO15061 1565 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 MAP3K15Q6ZN16 1313 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 ZNF233A6NK53 670 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 H0YIN7 160 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 ARHGAP31Q2M1Z3 1444 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 SMYD3Q9H7B4 428 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 BIRC2Q13490 618 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 NFRKBQ6P4R8 1299 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 TRPV6Q9H1D0 765 aa17.78■□□□□ 0.44
TSC2-222ENST00000568454 ABCB5Q2M3G0 1257 aa17.77■□□□□ 0.44
TSC2-222ENST00000568454 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.77■□□□□ 0.44
TSC2-222ENST00000568454 TOB2Q14106 344 aaPredicted RBP17.77■□□□□ 0.44
TSC2-222ENST00000568454 CCDC92Q53HC0 331 aaPredicted RBP17.77■□□□□ 0.44
TSC2-222ENST00000568454 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.77■□□□□ 0.447e-6■■■■■ 27.5
TSC2-222ENST00000568454 FAF2Q96CS3 445 aa17.77■□□□□ 0.44
TSC2-222ENST00000568454 VPS39Q96JC1 886 aa17.77■□□□□ 0.44
TSC2-222ENST00000568454 TTC1Q99614 292 aa17.77■□□□□ 0.44
TSC2-222ENST00000568454 GPC5P78333 572 aa17.77■□□□□ 0.44
TSC2-222ENST00000568454 C4orf50Q6ZRC1 276 aa17.77■□□□□ 0.44
TSC2-222ENST00000568454 DHX40Q8IX18 779 aaKnown RBP17.77■□□□□ 0.44
TSC2-222ENST00000568454 PUS7LQ9H0K6 701 aaKnown RBP17.77■□□□□ 0.44
TSC2-222ENST00000568454 EPN3Q9H201 632 aa17.77■□□□□ 0.44
TSC2-222ENST00000568454 DNAJC12Q9UKB3 198 aa17.77■□□□□ 0.44
TSC2-222ENST00000568454 ZRANB2O95218 330 aaKnown RBP eCLIP17.77■□□□□ 0.431e-6■■■■■ 36
TSC2-222ENST00000568454 SEMA3FQ13275 785 aa17.77■□□□□ 0.43
TSC2-222ENST00000568454 SURF1Q15526 300 aa17.77■□□□□ 0.43
TSC2-222ENST00000568454 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.43
TSC2-222ENST00000568454 TMEM259Q4ZIN3 620 aa17.77■□□□□ 0.43
TSC2-222ENST00000568454 OR6B2Q6IFH4 312 aa17.77■□□□□ 0.43
TSC2-222ENST00000568454 HDAC4P56524 1084 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 SYCE1LA8MT33 242 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 MEIS1O00470 390 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 ZFXP17010 805 aaPredicted RBP17.76■□□□□ 0.43
TSC2-222ENST00000568454 EPC1Q9H2F5 836 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 BTBD6Q96KE9 485 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 ESYT3A0FGR9 886 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 ARHGEF9O43307 516 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 CCDC22O60826 627 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 ARHGDIAP52565 204 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 VSNL1P62760 191 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 ZBTB18Q99592 522 aa17.76■□□□□ 0.43
TSC2-222ENST00000568454 WDR64B1ANS9 1081 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 MDH1P40925 334 aaKnown RBP17.75■□□□□ 0.43
TSC2-222ENST00000568454 NEK2P51955 445 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 GFPT1Q06210 699 aaPredicted RBP17.75■□□□□ 0.43
TSC2-222ENST00000568454 KIF19Q2TAC6 998 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 EXOC8Q8IYI6 725 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 CCDC24Q8N4L8 307 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.75■□□□□ 0.43
TSC2-222ENST00000568454 CNOT8Q9UFF9 292 aaKnown RBP17.75■□□□□ 0.43
TSC2-222ENST00000568454 ANAPC7Q9UJX3 599 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 A0A1W2PQC6 194 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 EPHB1P54762 984 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 KIF22Q14807 665 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 LCORLQ8N3X6 602 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 CATSPER1Q8NEC5 780 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 ANKRD7Q92527 254 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 SUCLA2Q9P2R7 463 aaPredicted RBP17.75■□□□□ 0.43
TSC2-222ENST00000568454 PVALEFA0A1B0GWK0 134 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 TOM1O60784 492 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 TFDP2Q14188 446 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 CXorf56Q9H5V9 222 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 ZBTB12Q9Y330 459 aaPredicted RBP17.75■□□□□ 0.43
TSC2-222ENST00000568454 ZNF804BA4D1E1 1349 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 ABL1P00519 1130 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 HNRNPCP07910 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
TSC2-222ENST00000568454 ELF1P32519 619 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 DDX47Q9H0S4 455 aaKnown RBP17.75■□□□□ 0.43
TSC2-222ENST00000568454 DCTN4Q9UJW0 460 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 L3MBTL1Q9Y468 752 aa17.75■□□□□ 0.43
TSC2-222ENST00000568454 GGPS1O95749 300 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 ATICP31939 592 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 DHX34Q14147 1143 aaKnown RBP17.74■□□□□ 0.43
TSC2-222ENST00000568454 RARS2Q5T160 578 aaKnown RBP17.74■□□□□ 0.43
TSC2-222ENST00000568454 NUDCD3Q8IVD9 361 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 SNX25Q9H3E2 840 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 PSD3Q9NYI0 1048 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 FBXL5Q9UKA1 691 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 NOC2LQ9Y3T9 749 aaKnown RBP17.74■□□□□ 0.43
TSC2-222ENST00000568454 WDR19Q8NEZ3 1342 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 EIF3HO15372 352 aaKnown RBP eCLIP17.74■□□□□ 0.43
TSC2-222ENST00000568454 DDIT3P35638 169 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 ERICH1Q86X53 443 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 ARL2BPQ9Y2Y0 163 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 SYF2O95926 243 aaKnown RBP17.74■□□□□ 0.43
TSC2-222ENST00000568454 TFAMQ00059 246 aaKnown RBP17.74■□□□□ 0.43
TSC2-222ENST00000568454 GUCY1A3Q02108 690 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 CEP170P1Q96L14 293 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 HDAC6Q9UBN7 1215 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 MLH3Q9UHC1 1453 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 STXBP3O00186 592 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 PSMA2P25787 234 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 PROSER3Q2NL68 480 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 SPATA4Q8NEY3 305 aa17.74■□□□□ 0.43
TSC2-222ENST00000568454 RNF103-CHMP3A0A140T963 221 aa17.73■□□□□ 0.43
TSC2-222ENST00000568454 TRIM49BA6NDI0 452 aa17.73■□□□□ 0.43
TSC2-222ENST00000568454 KCNA4P22459 653 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms