RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 VAV2P52735 878 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 CYP27A1Q02318 531 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 COG2Q14746 738 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 NFIL3Q16649 462 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 SUPT20HL1Q3ZLR7 823 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 ZC2HC1CQ53FD0 456 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 ODR4Q5SWX8 454 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 SNRNP48Q6IEG0 339 aaKnown RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 FBXO38Q6PIJ6 1188 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 SYN2Q92777 582 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 PURBQ96QR8 312 aaKnown RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 NLRC4Q9NPP4 1024 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 ZNF214Q9UL59 606 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 RCCD1A6NED2 376 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 CLIC2O15247 247 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 AFPP02771 609 aaKnown RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 EIF4A3P38919 411 aaKnown RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 POLR2FP61218 127 aaKnown RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 XRRA1Q6P2D8 792 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 PADI6Q6TGC4 694 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 CCDC94Q9BW85 323 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 LACRTQ9GZZ8 138 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 DEF6Q9H4E7 631 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 DBR1Q9UK59 544 aaKnown RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 POLR2AP24928 1970 aaKnown RBP19.92■□□□□ 0.78
SMPD3-211ENST00000568373 HIP1RO75146 1068 aa19.92■□□□□ 0.78
SMPD3-211ENST00000568373 LYPLA2O95372 231 aa19.92■□□□□ 0.78
SMPD3-211ENST00000568373 CASP4P49662 377 aa19.92■□□□□ 0.78
SMPD3-211ENST00000568373 MAPK7Q13164 816 aa19.92■□□□□ 0.78
SMPD3-211ENST00000568373 DAW1Q8N136 415 aa19.92■□□□□ 0.78
SMPD3-211ENST00000568373 TSGA10Q9BZW7 698 aa19.92■□□□□ 0.78
SMPD3-211ENST00000568373 TMOD4Q9NZQ9 345 aa19.92■□□□□ 0.78
SMPD3-211ENST00000568373 CATSPERGQ6ZRH7 1159 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 RSRC2Q7L4I2 434 aaKnown RBP19.91■□□□□ 0.78
SMPD3-211ENST00000568373 AFG3L2Q9Y4W6 797 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 PCDHB13Q9Y5F0 798 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 SSU72P8A0A1W2PR75 194 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 TESPA1A2RU30 521 aaPredicted RBP19.91■□□□□ 0.78
SMPD3-211ENST00000568373 ATP2A1O14983 1001 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 AKR1B10O60218 316 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 ATP9AO75110 1047 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 H2AFXP16104 143 aaPredicted RBP19.91■□□□□ 0.78
SMPD3-211ENST00000568373 RARRES1P49788 294 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 KIF5AQ12840 1032 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
SMPD3-211ENST00000568373 TMEM132BQ14DG7 1078 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 SFMBT2Q5VUG0 894 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 HGSNATQ68CP4 663 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 VSIG10LQ86VR7 867 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.91■□□□□ 0.78
SMPD3-211ENST00000568373 IFIH1Q9BYX4 1025 aaKnown RBP19.91■□□□□ 0.78
SMPD3-211ENST00000568373 GANQ9H2C0 597 aa19.91■□□□□ 0.78
SMPD3-211ENST00000568373 CCND2P30279 289 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 JAK3P52333 1124 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 AMPD2Q01433 879 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 ASTE1Q2TB18 679 aaPredicted RBP19.9■□□□□ 0.78
SMPD3-211ENST00000568373 DCAF17Q5H9S7 520 aaPredicted RBP19.9■□□□□ 0.78
SMPD3-211ENST00000568373 HS2ST1Q7LGA3 356 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 SRGAP1Q7Z6B7 1085 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 CEP112Q8N8E3 955 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 BORCS6Q96GS4 357 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 STRA6Q9BX79 667 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 TEX13BQ9BXU2 312 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 IKZF4Q9H2S9 585 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 PCDHA13Q9Y5I0 950 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 SBF1O95248 1867 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 WDR64B1ANS9 1081 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 PPP1R37O75864 691 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 SFNP31947 248 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 KRT76Q01546 638 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 APBA1Q02410 837 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 SLC9C1Q4G0N8 1177 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 KSR1Q8IVT5 923 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 SLC35C1Q96A29 364 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 ARID3AQ99856 593 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 GBP3Q9H0R5 595 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 PLCB1Q9NQ66 1216 aa19.9■□□□□ 0.78
SMPD3-211ENST00000568373 TLR2O60603 784 aa19.89■□□□□ 0.77
SMPD3-211ENST00000568373 SERPING1P05155 500 aa19.89■□□□□ 0.77
SMPD3-211ENST00000568373 NR3C2P08235 984 aa19.89■□□□□ 0.77
SMPD3-211ENST00000568373 YWHABP31946 246 aaKnown RBP19.89■□□□□ 0.77
SMPD3-211ENST00000568373 PSMC2P35998 433 aaKnown RBP19.89■□□□□ 0.77
SMPD3-211ENST00000568373 C4orf19Q8IY42 314 aa19.89■□□□□ 0.77
SMPD3-211ENST00000568373 GOLGA1Q92805 767 aa19.89■□□□□ 0.77
SMPD3-211ENST00000568373 GPRASP2Q96D09 838 aa19.89■□□□□ 0.77
SMPD3-211ENST00000568373 MKNK1Q9BUB5 465 aa19.89■□□□□ 0.77
SMPD3-211ENST00000568373 AGPAT3Q9NRZ7 376 aa19.89■□□□□ 0.77
SMPD3-211ENST00000568373 LARSQ9P2J5 1176 aaKnown RBP19.89■□□□□ 0.77
SMPD3-211ENST00000568373 TCEAL9Q9UHQ7 104 aa19.89■□□□□ 0.77
SMPD3-211ENST00000568373 MYPNQ86TC9 1320 aa19.88■□□□□ 0.77
SMPD3-211ENST00000568373 USO1O60763 962 aaKnown RBP19.88■□□□□ 0.77
SMPD3-211ENST00000568373 USP2O75604 605 aaPredicted RBP19.88■□□□□ 0.77
SMPD3-211ENST00000568373 CCNE2O96020 404 aa19.88■□□□□ 0.77
SMPD3-211ENST00000568373 CHMP4BP1P59074 171 aa19.88■□□□□ 0.77
SMPD3-211ENST00000568373 UGCGQ16739 394 aa19.88■□□□□ 0.77
SMPD3-211ENST00000568373 EXOC3L4Q17RC7 722 aa19.88■□□□□ 0.77
SMPD3-211ENST00000568373 WHAMMP3Q1A5X7 153 aa19.88■□□□□ 0.77
SMPD3-211ENST00000568373 TDRD12Q587J7 1177 aaKnown RBP19.88■□□□□ 0.77
SMPD3-211ENST00000568373 TEX35Q5T0J7 233 aa19.88■□□□□ 0.77
SMPD3-211ENST00000568373 TCERG1LQ5VWI1 586 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms