RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ZNF302Q9NR11 478 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 TUBE1Q9UJT0 475 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 EMSYQ7Z589 1322 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 NRCAMQ92823 1304 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 IGKV6D-21A0A0A0MT36 114 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 CCNT1O60563 726 aaKnown RBP10.74□□□□□ -0.69
SF3B3-211ENST00000568291 GAS7O60861 476 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 CHRNA1P02708 482 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 XBP1P17861 261 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 KRT2P35908 639 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 PLA2G5P39877 138 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 SETQ01105 290 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-211ENST00000568291 GALNT17Q6IS24 598 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.74□□□□□ -0.697e-7■□□□□ 11.2
SF3B3-211ENST00000568291 PLPPR4Q7Z2D5 763 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 TEX2Q8IWB9 1127 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 DIS3L2Q8IYB7 885 aaKnown RBP10.74□□□□□ -0.69
SF3B3-211ENST00000568291 MYOCDQ8IZQ8 938 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 WASF1Q92558 559 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 SLC5A5Q92911 643 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 TNFRSF25Q93038 417 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 ZNF668Q96K58 619 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-211ENST00000568291 DISC1Q9NRI5 854 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 TBC1D22BQ9NU19 505 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 LMCD1Q9NZU5 365 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 DDX25Q9UHL0 483 aaKnown RBP10.74□□□□□ -0.69
SF3B3-211ENST00000568291 KIAA1671Q9BY89 1806 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 LOXHD1Q8IVV2 1947 aa10.74□□□□□ -0.69
SF3B3-211ENST00000568291 CYP3A7-CYP3A51PA0A087WV96 503 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 HAX1O00165 279 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 EML1O00423 815 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 ZNF862O60290 1169 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 PSMD10O75832 226 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 MMP1P03956 469 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 AMHP03971 560 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 PSAPP07602 524 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 GHRP10912 638 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 GNAT1P11488 350 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 CYP3A7P24462 503 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 KLRC1P26715 233 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 RABEP1Q15276 862 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 Q4G0T1 1027 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 FAM160B1Q5W0V3 765 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 MTHFD1LQ6UB35 978 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 NEK8Q86SG6 692 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 ETNPPLQ8TBG4 499 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 TBC1D32Q96NH3 1257 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 UBE2ZQ9H832 354 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-211ENST00000568291 SUGCTQ9HAC7 445 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 CDHR5Q9HBB8 845 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 TCEAL9Q9UHQ7 104 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 GINS2Q9Y248 185 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 PCDHA10Q9Y5I2 948 aa10.73□□□□□ -0.69
SF3B3-211ENST00000568291 A0A087WWV3 80 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 MBLAC1A4D2B0 266 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-211ENST00000568291 ZBTB42B2RXF5 422 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 IBSPP21815 317 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-211ENST00000568291 KRT76Q01546 638 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 TRIM29Q14134 588 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 ZNF746Q6NUN9 644 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-211ENST00000568291 MIER3Q7Z3K6 550 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 BANK1Q8NDB2 785 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 ATP8B4Q8TF62 1192 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 HAS1Q92839 578 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 FAM122AQ96E09 287 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 C8orf76Q96K31 380 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 ZSCAN31Q96LW9 406 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-211ENST00000568291 MBOAT7Q96N66 472 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 RIT2Q99578 217 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 C17orf80Q9BSJ5 609 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 TEKT3Q9BXF9 490 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 UPF2Q9HAU5 1272 aaKnown RBP10.72□□□□□ -0.69
SF3B3-211ENST00000568291 INSL6Q9Y581 213 aa10.72□□□□□ -0.69
SF3B3-211ENST00000568291 MAFBQ9Y5Q3 323 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-211ENST00000568291 RRN3P2A6NIE6 340 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 WDR64B1ANS9 1081 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 ZBTB39O15060 712 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 MARCH6O60337 910 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 CAND2O75155 1236 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 UPP2O95045 317 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 PRKCEQ02156 737 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 NBR1Q14596 966 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 LPIN1Q14693 890 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 TMEM266Q2M3C6 531 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 PLEKHG4Q58EX7 1191 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 MUC6Q6W4X9 2439 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 LRRC71Q8N4P6 559 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 METTL13Q8N6R0 699 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 ZNF579Q8NAF0 562 aaKnown RBP10.71□□□□□ -0.69
SF3B3-211ENST00000568291 FAM184AQ8NB25 1140 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 SEPT8Q92599 483 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 YME1L1Q96TA2 773 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 BACH2Q9BYV9 841 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 EPHX3Q9H6B9 360 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 AGO3Q9H9G7 860 aaKnown RBP10.71□□□□□ -0.69
SF3B3-211ENST00000568291 HCN4Q9Y3Q4 1203 aa10.71□□□□□ -0.69
SF3B3-211ENST00000568291 CDY2AQ9Y6F7 541 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms