RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 IGSF9BQ9UPX0 1349 aa15.94■□□□□ 0.14
SMG1-213ENST00000567737 SPATA31C2B4DYI2 1134 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 PCP11498 1178 aaKnown RBP15.93■□□□□ 0.14
SMG1-213ENST00000567737 MARK3P27448 753 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 IGBP1P78318 339 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 KRT17Q04695 432 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 SMC1AQ14683 1233 aaKnown RBP15.93■□□□□ 0.14
SMG1-213ENST00000567737 FAM102BQ5T8I3 360 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 MFSD6Q6ZSS7 791 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 FCHSD1Q86WN1 690 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 ZKSCAN3Q9BRR0 538 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
SMG1-213ENST00000567737 KAT14Q9H8E8 782 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 FRYLO94915 3013 aa15.93■□□□□ 0.14
SMG1-213ENST00000567737 CFAP47Q6ZTR5 3102 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 CEP250Q9BV73 2442 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 TRIM6-TRIM34B2RNG4 842 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 GCOM1H8Y6P7 765 aaPredicted RBP15.92■□□□□ 0.14
SMG1-213ENST00000567737 PARP1P09874 1014 aaKnown RBP15.92■□□□□ 0.14
SMG1-213ENST00000567737 POLR2MP0CAP2 368 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 SP9P0CG40 484 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 CA8P35219 290 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 PPM1AP35813 382 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 TCF7P36402 384 aaPredicted RBP15.92■□□□□ 0.14
SMG1-213ENST00000567737 TMEM62Q0P6H9 643 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 NFX1Q12986 1120 aaKnown RBP15.92■□□□□ 0.14
SMG1-213ENST00000567737 MARCH8Q5T0T0 291 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 XRRA1Q6P2D8 792 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 GPR161Q8N6U8 529 aaKnown RBP15.92■□□□□ 0.14
SMG1-213ENST00000567737 SLC39A7Q92504 469 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 INPP4AQ96PE3 977 aaPredicted RBP15.92■□□□□ 0.14
SMG1-213ENST00000567737 TMX1Q9H3N1 280 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 CWH43Q9H720 699 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 C1orf112Q9NSG2 853 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 DZANK1Q9NVP4 752 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 ERAP1Q9NZ08 941 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 NCDNQ9UBB6 729 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 CDV3Q9UKY7 258 aaKnown RBP15.92■□□□□ 0.14
SMG1-213ENST00000567737 TELO2Q9Y4R8 837 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 KAT6AQ92794 2004 aa15.92■□□□□ 0.14
SMG1-213ENST00000567737 DENND3A2RUS2 1198 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 KINO60870 393 aaKnown RBP15.91■□□□□ 0.14
SMG1-213ENST00000567737 FGAP02671 866 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 PDE4AP27815 886 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 MRPS9P82933 396 aaKnown RBP15.91■□□□□ 0.14
SMG1-213ENST00000567737 TBC1D8BQ0IIM8 1120 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 SEMA3FQ13275 785 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 COL9A2Q14055 689 aaPredicted RBP15.91■□□□□ 0.14
SMG1-213ENST00000567737 CCDC178Q5BJE1 867 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 FAM43BQ6ZT52 329 aaPredicted RBP15.91■□□□□ 0.14
SMG1-213ENST00000567737 OTOP3Q7RTS5 596 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 C12orf76Q8N812 135 aaPredicted RBP15.91■□□□□ 0.14
SMG1-213ENST00000567737 MRPL43Q8N983 215 aaKnown RBP15.91■□□□□ 0.14
SMG1-213ENST00000567737 ESR2Q92731 530 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 CELF4Q9BZC1 486 aaKnown RBP15.91■□□□□ 0.14
SMG1-213ENST00000567737 RTEL1Q9NZ71 1219 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 BAHCC1Q9P281 2608 aa15.91■□□□□ 0.14
SMG1-213ENST00000567737 C2orf71A6NGG8 1288 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 PRR5-ARHGAP8B1AHC4 643 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 CLASP2O75122 1294 aaKnown RBP15.9■□□□□ 0.14
SMG1-213ENST00000567737 ADRB1P08588 477 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 HAND2P61296 217 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 ARHGAP8P85298 464 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 BMS1Q14692 1282 aaKnown RBP15.9■□□□□ 0.14
SMG1-213ENST00000567737 TMEM266Q2M3C6 531 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 SPECC1Q5M775 1068 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 KCNT2Q6UVM3 1135 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 CCDC149Q6ZUS6 474 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 SUMF1Q8NBK3 374 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 TMEM87AQ8NBN3 555 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 GIMAP8Q8ND71 665 aaPredicted RBP15.9■□□□□ 0.14
SMG1-213ENST00000567737 GLG1Q92896 1179 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 ZNF558Q96NG5 402 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 SENP7Q9BQF6 1050 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 OCEL1Q9H607 264 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 KCNK12Q9HB15 430 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 ATP6V0A4Q9HBG4 840 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 WNT16Q9UBV4 365 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 TTC41PQ6P2S7 1318 aa15.9■□□□□ 0.14
SMG1-213ENST00000567737 FNDC1Q4ZHG4 1894 aaPredicted RBP15.89■□□□□ 0.13
SMG1-213ENST00000567737 RRN3P2A6NIE6 340 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 ZBTB5O15062 677 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 CFHP08603 1231 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 C7P10643 843 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 LMNB2Q03252 620 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 TRAF1Q13077 416 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 VARS2Q5ST30 1063 aaKnown RBP15.89■□□□□ 0.13
SMG1-213ENST00000567737 SLC24A5Q71RS6 500 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 IQCA1Q86XH1 822 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 C1orf210Q8IVY1 113 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 ZBTB10Q96DT7 871 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 ADAM2Q99965 735 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 RTKNQ9BST9 563 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 RNF41Q9H4P4 317 aaPredicted RBP15.89■□□□□ 0.13
SMG1-213ENST00000567737 RGS18Q9NS28 235 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 MYH6P13533 1939 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 OTOGLQ3ZCN5 2332 aa15.89■□□□□ 0.13
SMG1-213ENST00000567737 MGEA5O60502 916 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 PPP1R11O60927 126 aaPredicted RBP15.88■□□□□ 0.13
SMG1-213ENST00000567737 FGFR1P11362 822 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms