RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 APOL5Q9BWW9 433 aa17.69■□□□□ 0.42
PALB2-205ENST00000567003 AGO4Q9HCK5 861 aaKnown RBP17.69■□□□□ 0.42
PALB2-205ENST00000567003 PCDHB7Q9Y5E2 793 aa17.69■□□□□ 0.42
PALB2-205ENST00000567003 MYO15AQ9UKN7 3530 aa17.69■□□□□ 0.42
PALB2-205ENST00000567003 NFASCO94856 1347 aa17.69■□□□□ 0.42
PALB2-205ENST00000567003 KDM3AQ9Y4C1 1321 aa17.69■□□□□ 0.42
PALB2-205ENST00000567003 MAFGO15525 162 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 CCNE2O96020 404 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 RPLP2P05387 115 aaKnown RBP17.68■□□□□ 0.42
PALB2-205ENST00000567003 SP100P23497 879 aaPredicted RBP17.68■□□□□ 0.42
PALB2-205ENST00000567003 KLRC1P26715 233 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 MCM5P33992 734 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 VCPP55072 806 aaKnown RBP17.68■□□□□ 0.42
PALB2-205ENST00000567003 TCF15Q12870 199 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 PLPPR4Q7Z2D5 763 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 BMP8AQ7Z5Y6 402 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 ADAM2Q99965 735 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 PHF7Q9BWX1 381 aaPredicted RBP17.68■□□□□ 0.42
PALB2-205ENST00000567003 TLR9Q9NR96 1032 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 FAM86C1Q9NVL1 165 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 TMEM260Q9NX78 707 aa17.68■□□□□ 0.42
PALB2-205ENST00000567003 ZFHX2Q9C0A1 2572 aaPredicted RBP17.67■□□□□ 0.42
PALB2-205ENST00000567003 SLC27A2O14975 620 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 RPS6KA5O75582 802 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 FGF18O76093 207 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 FGFR1P11362 822 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 PTPN5P54829 565 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 DUSP6Q16828 381 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 PLPP4Q5VZY2 271 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 SUGP1Q8IWZ8 645 aaKnown RBP17.67■□□□□ 0.42
PALB2-205ENST00000567003 THNSL1Q8IYQ7 743 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 KIAA0319LQ8IZA0 1049 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 FANCBQ8NB91 859 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 COLGALT1Q8NBJ5 622 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 ATP8B4Q8TF62 1192 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 TMEM87BQ96K49 555 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 ANO3Q9BYT9 981 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 LSG1Q9H089 658 aaKnown RBP17.67■□□□□ 0.42
PALB2-205ENST00000567003 TYW1Q9NV66 732 aaKnown RBP17.67■□□□□ 0.42
PALB2-205ENST00000567003 CDH22Q9UJ99 828 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 ST3GAL5Q9UNP4 418 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 PCDHB12Q9Y5F1 795 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 SLC12A7Q9Y666 1083 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 CNTNAP5Q8WYK1 1306 aa17.67■□□□□ 0.42
PALB2-205ENST00000567003 DENND3A2RUS2 1198 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 BACH1O14867 736 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 CALM1P0DP23 149 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 CALM2P0DP24 149 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 CALM3P0DP25 149 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 NAPAP54920 295 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 CEP55Q53EZ4 464 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 LLGL2Q6P1M3 1020 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 CCDC60Q8IWA6 550 aaPredicted RBP17.66■□□□□ 0.42
PALB2-205ENST00000567003 NME8Q8N427 588 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 FBXL6Q8N531 539 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 SUSD6Q92537 303 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 OSMRQ99650 979 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 DMDP11532 3685 aa17.66■□□□□ 0.42
PALB2-205ENST00000567003 ZBTB42B2RXF5 422 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 C9IYK1 514 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 FSCN2O14926 492 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 ATG7O95352 703 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 PBX3P40426 434 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 LIFRP42702 1097 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 KIZQ2M2Z5 673 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 FAM228AQ86W67 206 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 TMTC2Q8N394 836 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 TNPO1Q92973 898 aaKnown RBP17.65■□□□□ 0.42
PALB2-205ENST00000567003 NEK1Q96PY6 1258 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 MTA3Q9BTC8 594 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 CWH43Q9H720 699 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 RIC8AQ9NPQ8 531 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 RGS18Q9NS28 235 aa17.65■□□□□ 0.42
PALB2-205ENST00000567003 IGKV6D-21A0A0A0MT36 114 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 HBP1O60381 514 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 PDGFBP01127 241 aaPredicted RBP17.64■□□□□ 0.41
PALB2-205ENST00000567003 VTNP04004 478 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 ATP4AP20648 1035 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 TECP42680 631 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 ADCY7P51828 1080 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 UBE3AQ05086 875 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 SIGLEC14Q08ET2 396 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 ABHD15Q6UXT9 468 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 TRMT1LQ7Z2T5 733 aaKnown RBP17.64■□□□□ 0.41
PALB2-205ENST00000567003 ASIC4Q96FT7 647 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 AAASQ9NRG9 546 aa17.64■□□□□ 0.41
PALB2-205ENST00000567003 HIDE1A8MVS5 230 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 MEIS1O00470 390 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 FAM160B1Q5W0V3 765 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 PDXDC2PQ6P474 469 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 SYCE2Q6PIF2 218 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 SLC24A5Q71RS6 500 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 TCEANC2Q96MN5 208 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 S1PR5Q9H228 398 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 ATP6V0A4Q9HBG4 840 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 ZNF302Q9NR11 478 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 C1orf112Q9NSG2 853 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 RNF19AQ9NV58 838 aa17.63■□□□□ 0.41
PALB2-205ENST00000567003 MYH9P35579 1960 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms