RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 MED24O75448 989 aa18.36■□□□□ 0.53
CMTM3-213ENST00000566756 PALMO75781 387 aa18.36■□□□□ 0.53
CMTM3-213ENST00000566756 KLRC1P26715 233 aa18.36■□□□□ 0.53
CMTM3-213ENST00000566756 CXCR5P32302 372 aa18.36■□□□□ 0.53
CMTM3-213ENST00000566756 NAP1L1P55209 391 aaKnown RBP18.36■□□□□ 0.53
CMTM3-213ENST00000566756 PAK2Q13177 524 aa18.36■□□□□ 0.53
CMTM3-213ENST00000566756 APOBEC3FQ8IUX4 373 aaKnown RBP18.36■□□□□ 0.53
CMTM3-213ENST00000566756 ANKRD13CQ8N6S4 541 aa18.36■□□□□ 0.53
CMTM3-213ENST00000566756 RIN2Q8WYP3 895 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-213ENST00000566756 INPP4AQ96PE3 977 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-213ENST00000566756 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
CMTM3-213ENST00000566756 VCPKMTQ9H867 229 aa18.36■□□□□ 0.53
CMTM3-213ENST00000566756 METTL14Q9HCE5 456 aaKnown RBP18.36■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L15C9J2P7 530 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L13C9JLJ4 530 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L11C9JVI0 530 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L18D6R9N7 530 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L22D6RA61 530 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L17D6RBQ6 530 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L19D6RCP7 530 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L20D6RJB6 530 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 MEIS2O14770 477 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 CALUO43852 315 aaPredicted RBP18.35■□□□□ 0.53
CMTM3-213ENST00000566756 HSF2BPO75031 334 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 KRT18P05783 430 aaKnown RBP18.35■□□□□ 0.53
CMTM3-213ENST00000566756 NR2F2P24468 414 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 PRKCIP41743 596 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 STAT2P52630 851 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L24Q0WX57 530 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 RAPGEF1Q13905 1077 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 KNOP1Q1ED39 458 aaKnown RBP18.35■□□□□ 0.53
CMTM3-213ENST00000566756 DPY19L2P1Q6NXN4 242 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 USP17L6PQ6QN14 398 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 NELFCDQ8IXH7 590 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 C1orf131Q8NDD1 294 aaKnown RBP18.35■□□□□ 0.53
CMTM3-213ENST00000566756 HOOK2Q96ED9 719 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 GDAP1L1Q96MZ0 367 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 AMNQ9BXJ7 453 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 RASSF4Q9H2L5 321 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 DNM3Q9UQ16 869 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 A0A087X0T9 212 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 SLC16A3O15427 465 aaKnown RBP18.35■□□□□ 0.53
CMTM3-213ENST00000566756 CTNND1O60716 968 aaKnown RBP18.35■□□□□ 0.53
CMTM3-213ENST00000566756 AFPP02771 609 aaKnown RBP18.35■□□□□ 0.53
CMTM3-213ENST00000566756 FAM228BP0C875 321 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 CIITAP33076 1130 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 ARHGAP4P98171 946 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 TRAF1Q13077 416 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 GIT2Q14161 759 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 KIAA0753Q2KHM9 967 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 TBC1D7Q9P0N9 293 aa18.35■□□□□ 0.53
CMTM3-213ENST00000566756 ARMCX3Q9UH62 379 aaPredicted RBP18.35■□□□□ 0.53
CMTM3-213ENST00000566756 DOCK1Q14185 1865 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 SREBF1P36956 1147 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 SKOR1P84550 965 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 SLC7A5Q01650 507 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 CATSPER3Q86XQ3 398 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 GJA10Q969M2 543 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 RUFY1Q96T51 708 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 SYT17Q9BSW7 474 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 FAM107BQ9H098 131 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 TMEM59LQ9UK28 342 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 PRR12Q9ULL5 1215 aa18.34■□□□□ 0.53
CMTM3-213ENST00000566756 ASTN2O75129 1339 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-213ENST00000566756 GTPBP10A4D1E9 387 aaKnown RBP18.33■□□□□ 0.53
CMTM3-213ENST00000566756 RPL13P26373 211 aaKnown RBP18.33■□□□□ 0.53
CMTM3-213ENST00000566756 MATR3P43243 847 aaKnown RBP eCLIP18.33■□□□□ 0.53
CMTM3-213ENST00000566756 KIAA1755Q5JYT7 1200 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 DCAF15Q66K64 600 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 IRF2BP2Q7Z5L9 587 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 FBXO11Q86XK2 927 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 CD302Q8IX05 232 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 FAM133AQ8N9E0 248 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 WHAMMQ8TF30 809 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 CHURC1Q8WUH1 139 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 PBKQ96KB5 322 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 PSMB7Q99436 277 aa18.33■□□□□ 0.53
CMTM3-213ENST00000566756 NPHP3-ACAD11A0A0J9YXS1 232 aa18.33■□□□□ 0.52
CMTM3-213ENST00000566756 ERCC3P19447 782 aa18.33■□□□□ 0.52
CMTM3-213ENST00000566756 TNNC1P63316 161 aa18.33■□□□□ 0.52
CMTM3-213ENST00000566756 NFIL3Q16649 462 aa18.33■□□□□ 0.52
CMTM3-213ENST00000566756 EMC10Q5UCC4 262 aa18.33■□□□□ 0.52
CMTM3-213ENST00000566756 POLR3CQ9BUI4 534 aaPredicted RBP18.33■□□□□ 0.52
CMTM3-213ENST00000566756 TYW1Q9NV66 732 aaKnown RBP18.33■□□□□ 0.52
CMTM3-213ENST00000566756 ADAMTS1Q9UHI8 967 aa18.33■□□□□ 0.52
CMTM3-213ENST00000566756 LCMT1Q9UIC8 334 aa18.33■□□□□ 0.52
CMTM3-213ENST00000566756 INTUQ9ULD6 942 aa18.33■□□□□ 0.52
CMTM3-213ENST00000566756 PPP2R3BQ9Y5P8 575 aa18.33■□□□□ 0.52
CMTM3-213ENST00000566756 POTEFA5A3E0 1075 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 GFPT2O94808 682 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 POTEIP0CG38 1075 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 SPATA31C1P0DKV0 1188 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 MYBP10242 640 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 XRCC5P13010 732 aaKnown RBP18.32■□□□□ 0.52
CMTM3-213ENST00000566756 UCHL3P15374 230 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 IKQ13123 557 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-213ENST00000566756 POTEGQ6S5H5 508 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 POTEEQ6S8J3 1075 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 FAM160B2Q86V87 743 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 IQCKQ8N0W5 287 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms