RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 F13A1P00488 732 aa29.24■■■□□ 2.27
NME3-209ENST00000566600 MUTP22033 750 aa29.24■■■□□ 2.27
NME3-209ENST00000566600 RPA1P27694 616 aa29.24■■■□□ 2.27
NME3-209ENST00000566600 TBC1D8BQ0IIM8 1120 aa29.24■■■□□ 2.27
NME3-209ENST00000566600 MTERF2Q49AM1 385 aa29.24■■■□□ 2.27
NME3-209ENST00000566600 EXOC8Q8IYI6 725 aa29.24■■■□□ 2.27
NME3-209ENST00000566600 DNAJB3Q8WWF6 145 aa29.24■■■□□ 2.27
NME3-209ENST00000566600 ZNF396Q96N95 335 aaPredicted RBP29.24■■■□□ 2.27
NME3-209ENST00000566600 WRAP73Q9P2S5 460 aaPredicted RBP29.24■■■□□ 2.27
NME3-209ENST00000566600 A0A1W2PPC1 479 aa29.23■■■□□ 2.27
NME3-209ENST00000566600 TMOD1P28289 359 aa29.23■■■□□ 2.27
NME3-209ENST00000566600 FAM26DQ5JW98 314 aa29.23■■■□□ 2.27
NME3-209ENST00000566600 FAM173BQ6P4H8 233 aa29.23■■■□□ 2.27
NME3-209ENST00000566600 PSRC1Q6PGN9 363 aaPredicted RBP29.23■■■□□ 2.27
NME3-209ENST00000566600 JPH2Q9BR39 696 aaPredicted RBP29.23■■■□□ 2.27
NME3-209ENST00000566600 FAM49AQ9H0Q0 323 aaPredicted RBP29.23■■■□□ 2.27
NME3-209ENST00000566600 CYP26B1Q9NR63 512 aa29.23■■■□□ 2.27
NME3-209ENST00000566600 COLQQ9Y215 455 aaPredicted RBP29.23■■■□□ 2.27
NME3-209ENST00000566600 VWA3AA6NCI4 1184 aa29.22■■■□□ 2.27
NME3-209ENST00000566600 SPATA31C1P0DKV0 1188 aa29.22■■■□□ 2.27
NME3-209ENST00000566600 XRCC6P12956 609 aaKnown RBP eCLIP29.22■■■□□ 2.276e-11■■■■□ 23.7
NME3-209ENST00000566600 IL17AQ16552 155 aa29.22■■■□□ 2.27
NME3-209ENST00000566600 IER5Q5VY09 327 aa29.22■■■□□ 2.27
NME3-209ENST00000566600 CATSPER3Q86XQ3 398 aa29.22■■■□□ 2.27
NME3-209ENST00000566600 METTL13Q8N6R0 699 aa29.22■■■□□ 2.27
NME3-209ENST00000566600 ZBTB10Q96DT7 871 aa29.22■■■□□ 2.27
NME3-209ENST00000566600 ANKEF1Q9NU02 776 aa29.22■■■□□ 2.27
NME3-209ENST00000566600 CLIC4Q9Y696 253 aa29.22■■■□□ 2.27
NME3-209ENST00000566600 M0QZ92 97 aa29.21■■■□□ 2.27
NME3-209ENST00000566600 CCT6AP40227 531 aaKnown RBP29.21■■■□□ 2.27
NME3-209ENST00000566600 FOXD4L5Q5VV16 416 aaPredicted RBP29.21■■■□□ 2.27
NME3-209ENST00000566600 KRT79Q5XKE5 535 aa29.21■■■□□ 2.27
NME3-209ENST00000566600 TRAF7Q6Q0C0 670 aa29.21■■■□□ 2.27
NME3-209ENST00000566600 FOXD4L4Q8WXT5 416 aaPredicted RBP29.21■■■□□ 2.27
NME3-209ENST00000566600 CEP170P1Q96L14 293 aa29.21■■■□□ 2.27
NME3-209ENST00000566600 AK8Q96MA6 479 aa29.21■■■□□ 2.27
NME3-209ENST00000566600 NACC1Q96RE7 527 aa29.21■■■□□ 2.27
NME3-209ENST00000566600 TMEM150BA6NC51 233 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 MED24O75448 989 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 CTSHP09668 335 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 MRPS6P82932 125 aaKnown RBP29.2■■■□□ 2.26
NME3-209ENST00000566600 XKR9Q5GH70 373 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 PLA2G4FQ68DD2 849 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 EFCAB12Q6NXP0 572 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 KIAA0319LQ8IZA0 1049 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 TDHQ8IZJ6 230 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 ZNF710Q8N1W2 664 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 SNX29Q8TEQ0 813 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 CCDC43Q96MW1 224 aaKnown RBP29.2■■■□□ 2.26
NME3-209ENST00000566600 MAP7D2Q96T17 732 aa29.2■■■□□ 2.26
NME3-209ENST00000566600 MAFO75444 373 aaPredicted RBP29.19■■■□□ 2.26
NME3-209ENST00000566600 RFC5P40937 340 aa29.19■■■□□ 2.26
NME3-209ENST00000566600 DNM2P50570 870 aa29.19■■■□□ 2.26
NME3-209ENST00000566600 EPHB4P54760 987 aa29.19■■■□□ 2.26
NME3-209ENST00000566600 PKP1Q13835 747 aa29.19■■■□□ 2.26
NME3-209ENST00000566600 PTPAQ15257 358 aa29.19■■■□□ 2.26
NME3-209ENST00000566600 DEFB128Q7Z7B8 93 aa29.19■■■□□ 2.26
NME3-209ENST00000566600 SLC7A3Q8WY07 619 aa29.19■■■□□ 2.26
NME3-209ENST00000566600 USP28Q96RU2 1077 aa29.19■■■□□ 2.26
NME3-209ENST00000566600 CEP89Q96ST8 783 aa29.19■■■□□ 2.26
NME3-209ENST00000566600 MORC2Q9Y6X9 1032 aaPredicted RBP29.19■■■□□ 2.26
NME3-209ENST00000566600 BRD1O95696 1058 aa29.18■■■□□ 2.26
NME3-209ENST00000566600 FGBP02675 491 aa29.18■■■□□ 2.26
NME3-209ENST00000566600 CXCL10P02778 98 aa29.18■■■□□ 2.26
NME3-209ENST00000566600 ACRP10323 421 aa29.18■■■□□ 2.26
NME3-209ENST00000566600 LONP1P36776 959 aaKnown RBP29.18■■■□□ 2.26
NME3-209ENST00000566600 ANP32AP39687 249 aaKnown RBP29.18■■■□□ 2.26
NME3-209ENST00000566600 NPEPPSP55786 919 aa29.18■■■□□ 2.26
NME3-209ENST00000566600 CEBPZQ03701 1054 aaKnown RBP29.18■■■□□ 2.26
NME3-209ENST00000566600 ATL3Q6DD88 541 aa29.18■■■□□ 2.26
NME3-209ENST00000566600 C16orf59Q7L2K0 433 aa29.18■■■□□ 2.26
NME3-209ENST00000566600 FTOQ9C0B1 505 aaKnown RBP eCLIP29.18■■■□□ 2.26
NME3-209ENST00000566600 SUGCTQ9HAC7 445 aa29.18■■■□□ 2.26
NME3-209ENST00000566600 DAXXQ9UER7 740 aaPredicted RBP29.18■■■□□ 2.26
NME3-209ENST00000566600 CHRNA1P02708 482 aa29.17■■■□□ 2.26
NME3-209ENST00000566600 ACTN1P12814 892 aa29.17■■■□□ 2.26
NME3-209ENST00000566600 POLGP54098 1239 aaPredicted RBP29.17■■■□□ 2.26
NME3-209ENST00000566600 SLC39A14Q15043 492 aa29.17■■■□□ 2.26
NME3-209ENST00000566600 TMEM240Q5SV17 173 aa29.17■■■□□ 2.26
NME3-209ENST00000566600 LINC01465Q8N7H1 131 aa29.17■■■□□ 2.26
NME3-209ENST00000566600 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.17■■■□□ 2.268e-10■□□□□ 9.4
NME3-209ENST00000566600 SH2D3AQ9BRG2 576 aa29.17■■■□□ 2.26
NME3-209ENST00000566600 MTIF3Q9H2K0 278 aaKnown RBP29.17■■■□□ 2.26
NME3-209ENST00000566600 DBR1Q9UK59 544 aaKnown RBP29.17■■■□□ 2.26
NME3-209ENST00000566600 TRPV2Q9Y5S1 764 aa29.17■■■□□ 2.26
NME3-209ENST00000566600 MYH15Q9Y2K3 1946 aa29.17■■■□□ 2.26
NME3-209ENST00000566600 IGKV6-21A0A0C4DH24 114 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 SLC26A4O43511 780 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 NBNO60934 754 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 NASPP49321 788 aaPredicted RBP29.16■■■□□ 2.26
NME3-209ENST00000566600 CDC42EP1Q00587 391 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 MGAT3Q09327 533 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 MBTPS1Q14703 1052 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 POTEGQ6S5H5 508 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 ZNF365Q70YC5 407 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 KCTD17Q8N5Z5 321 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 PIGOQ8TEQ8 1089 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 CELF4Q9BZC1 486 aaKnown RBP29.16■■■□□ 2.26
NME3-209ENST00000566600 CDY2AQ9Y6F7 541 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 SCN5AQ14524 2016 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms