RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 DHX16O60231 1041 aaKnown RBP19.25■□□□□ 0.67
CLK3-217ENST00000566126 KINO60870 393 aaKnown RBP19.25■□□□□ 0.67
CLK3-217ENST00000566126 FGFR1P11362 822 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 MARK3P27448 753 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 TCF7P36402 384 aaPredicted RBP19.25■□□□□ 0.67
CLK3-217ENST00000566126 ARHGAP8P85298 464 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 SMC1AQ14683 1233 aaKnown RBP19.25■□□□□ 0.67
CLK3-217ENST00000566126 ACAP1Q15027 740 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 POTEGQ6S5H5 508 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 KCNT2Q6UVM3 1135 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 LRRC55Q6ZSA7 311 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 MAML2Q8IZL2 1156 aaPredicted RBP19.25■□□□□ 0.67
CLK3-217ENST00000566126 GPR161Q8N6U8 529 aaKnown RBP19.25■□□□□ 0.67
CLK3-217ENST00000566126 PNMA1Q8ND90 353 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 GPATCH3Q96I76 525 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 ZKSCAN3Q9BRR0 538 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 FRYQ5TBA9 3013 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 C9IYK1 514 aa19.24■□□□□ 0.67
CLK3-217ENST00000566126 FIBPO43427 364 aa19.24■□□□□ 0.67
CLK3-217ENST00000566126 IGBP1P78318 339 aa19.24■□□□□ 0.67
CLK3-217ENST00000566126 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
CLK3-217ENST00000566126 OTOP3Q7RTS5 596 aa19.24■□□□□ 0.67
CLK3-217ENST00000566126 FCHSD1Q86WN1 690 aa19.24■□□□□ 0.67
CLK3-217ENST00000566126 CELF4Q9BZC1 486 aaKnown RBP19.24■□□□□ 0.67
CLK3-217ENST00000566126 RGS18Q9NS28 235 aa19.24■□□□□ 0.67
CLK3-217ENST00000566126 DZANK1Q9NVP4 752 aa19.24■□□□□ 0.67
CLK3-217ENST00000566126 RTEL1Q9NZ71 1219 aa19.24■□□□□ 0.67
CLK3-217ENST00000566126 M0QZ92 97 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 FGAP02671 866 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 RPLP2P05387 115 aaKnown RBP19.23■□□□□ 0.67
CLK3-217ENST00000566126 EPCAMP16422 314 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 TGM1P22735 817 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 LMNB2Q03252 620 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 NFX1Q12986 1120 aaKnown RBP19.23■□□□□ 0.67
CLK3-217ENST00000566126 TMC5Q6UXY8 1006 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 DGKHQ86XP1 1220 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 SAMD3Q8N6K7 520 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 ADAM2Q99965 735 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 SENP7Q9BQF6 1050 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 ERAP1Q9NZ08 941 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 CA14Q9ULX7 337 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 FRMPD4Q14CM0 1322 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 KDM3AQ9Y4C1 1321 aa19.23■□□□□ 0.67
CLK3-217ENST00000566126 RFX1P22670 979 aa19.22■□□□□ 0.67
CLK3-217ENST00000566126 PPM1AP35813 382 aa19.22■□□□□ 0.67
CLK3-217ENST00000566126 KRT17Q04695 432 aa19.22■□□□□ 0.67
CLK3-217ENST00000566126 COL9A3Q14050 684 aaPredicted RBP19.22■□□□□ 0.67
CLK3-217ENST00000566126 SLC24A5Q71RS6 500 aa19.22■□□□□ 0.67
CLK3-217ENST00000566126 COL26A1Q96A83 441 aa19.22■□□□□ 0.67
CLK3-217ENST00000566126 C1orf112Q9NSG2 853 aa19.22■□□□□ 0.67
CLK3-217ENST00000566126 IGSF9Q9P2J2 1179 aa19.22■□□□□ 0.67
CLK3-217ENST00000566126 ZFYVE26Q68DK2 2539 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 GSTTP1A0A1W2PQM5 241 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 GCOM1H8Y6P7 765 aaPredicted RBP19.21■□□□□ 0.67
CLK3-217ENST00000566126 STAM2O75886 525 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 POLR2MP0CAP2 368 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 GLULP15104 373 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 HAND2P61296 217 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 PHLDB3Q6NSJ2 640 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 CCDC149Q6ZUS6 474 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 RSAD2Q8WXG1 361 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 MTMR8Q96EF0 704 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 ZNF558Q96NG5 402 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 CASD1Q96PB1 797 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 SPG21Q9NZD8 308 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 SIT1Q9Y3P8 196 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 ZZEF1O43149 2961 aa19.21■□□□□ 0.67
CLK3-217ENST00000566126 DENND3A2RUS2 1198 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 INSRRP14616 1297 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 GPR149Q86SP6 731 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 MIER1Q8N108 512 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 PI4K2BQ8TCG2 481 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 SLC22A17Q8WUG5 538 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 TMEM117Q9H0C3 514 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 ATP6V0A4Q9HBG4 840 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 SH2B1Q9NRF2 756 aaPredicted RBP19.2■□□□□ 0.66
CLK3-217ENST00000566126 RNF19AQ9NV58 838 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 TMEM161AQ9NX61 479 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 NOC2LQ9Y3T9 749 aaKnown RBP19.2■□□□□ 0.66
CLK3-217ENST00000566126 PCDHA2Q9Y5H9 948 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 PATJQ8NI35 1801 aa19.2■□□□□ 0.66
CLK3-217ENST00000566126 SPEGQ15772 3267 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 RRN3P2A6NIE6 340 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 SPTLC1O15269 473 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 N4BP1O75113 896 aaKnown RBP19.19■□□□□ 0.66
CLK3-217ENST00000566126 PARP1P09874 1014 aaKnown RBP19.19■□□□□ 0.66
CLK3-217ENST00000566126 FAM189BP81408 668 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 KRT76Q01546 638 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 PPM1JQ5JR12 505 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 MFSD6Q6ZSS7 791 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 TBC1D10CQ8IV04 446 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 SLC39A11Q8N1S5 342 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 KAT14Q9H8E8 782 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 CDHR5Q9HBB8 845 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 MIA3Q5JRA6 1907 aa19.19■□□□□ 0.66
CLK3-217ENST00000566126 ATP9AO75110 1047 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 CXCL14O95715 111 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 CA8P35219 290 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 STAG2Q8N3U4 1231 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 TRAPPC12Q8WVT3 735 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms