RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 FOXB2Q5VYV0 432 aa5.17□□□□□ -1.58
PALB2-204ENST00000566069 SPTY2D1Q68D10 685 aaPredicted RBP5.17□□□□□ -1.58
PALB2-204ENST00000566069 SCYL1Q96KG9 808 aa5.17□□□□□ -1.58
PALB2-204ENST00000566069 EXOC2Q96KP1 924 aa5.17□□□□□ -1.58
PALB2-204ENST00000566069 ZDHHC5Q9C0B5 715 aa5.17□□□□□ -1.58
PALB2-204ENST00000566069 C12orf65Q9H3J6 166 aaKnown RBP5.17□□□□□ -1.58
PALB2-204ENST00000566069 ARHGAP6O43182 974 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 ADH4P08319 380 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 GNAT1P11488 350 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 ETV4P43268 484 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 NTRK3Q16288 839 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 FAM209AQ5JX71 171 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 MRGPRGQ86SM5 289 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 JAZF1Q86VZ6 243 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 ULK2Q8IYT8 1036 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 GPR135Q8IZ08 494 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
PALB2-204ENST00000566069 RNPC3Q96LT9 517 aaKnown RBP5.16□□□□□ -1.58
PALB2-204ENST00000566069 CRAMP1Q96RY5 1269 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 DHRS4Q9BTZ2 278 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 CD244Q9BZW8 370 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 KIAA1683Q9H0B3 1180 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 MRPS23Q9Y3D9 190 aaKnown RBP5.16□□□□□ -1.58
PALB2-204ENST00000566069 TBX22Q9Y458 520 aa5.16□□□□□ -1.58
PALB2-204ENST00000566069 FAM90A27PA6NNH2 459 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 PDE6AP16499 860 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 MAKP20794 623 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 GJA4P35212 333 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 RPS19P39019 145 aaKnown RBP5.15□□□□□ -1.59
PALB2-204ENST00000566069 SQSTM1Q13501 440 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 DCAF4Q8WV16 495 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 CLIP3Q96DZ5 547 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 KANSL2Q9H9L4 492 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 SLC2A4RGQ9NR83 387 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 TMEM260Q9NX78 707 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 NUB1Q9Y5A7 615 aa5.15□□□□□ -1.59
PALB2-204ENST00000566069 MRPL42Q9Y6G3 142 aaKnown RBP5.15□□□□□ -1.59
PALB2-204ENST00000566069 POLR2AP24928 1970 aaKnown RBP5.15□□□□□ -1.59
PALB2-204ENST00000566069 SOD2P04179 222 aa5.14□□□□□ -1.59
PALB2-204ENST00000566069 IL13RA1P78552 427 aa5.14□□□□□ -1.59
PALB2-204ENST00000566069 KIZQ2M2Z5 673 aa5.14□□□□□ -1.59
PALB2-204ENST00000566069 STYK1Q6J9G0 422 aa5.14□□□□□ -1.59
PALB2-204ENST00000566069 DPY19L2P1Q6NXN4 242 aa5.14□□□□□ -1.59
PALB2-204ENST00000566069 GIMAP6Q6P9H5 292 aa5.14□□□□□ -1.59
PALB2-204ENST00000566069 DPP8Q6V1X1 898 aaPredicted RBP5.14□□□□□ -1.59
PALB2-204ENST00000566069 USP30Q70CQ3 517 aa5.14□□□□□ -1.59
PALB2-204ENST00000566069 MAMDC2Q7Z304 686 aaPredicted RBP5.14□□□□□ -1.59
PALB2-204ENST00000566069 VOPP1Q96AW1 172 aa5.14□□□□□ -1.59
PALB2-204ENST00000566069 ZFYVE21Q9BQ24 234 aa5.14□□□□□ -1.59
PALB2-204ENST00000566069 AGO3Q9H9G7 860 aaKnown RBP5.14□□□□□ -1.59
PALB2-204ENST00000566069 PUF60Q9UHX1 559 aaKnown RBP5.14□□□□□ -1.59
PALB2-204ENST00000566069 TMA7Q9Y2S6 64 aaKnown RBP5.14□□□□□ -1.59
PALB2-204ENST00000566069 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 C6orf222P0C671 652 aaPredicted RBP5.13□□□□□ -1.59
PALB2-204ENST00000566069 GABREP78334 506 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 GRM7Q14831 915 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 EIF4HQ15056 248 aaKnown RBP5.13□□□□□ -1.59
PALB2-204ENST00000566069 WDR72Q3MJ13 1102 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 TRIM68Q6AZZ1 485 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 HOMER1Q86YM7 354 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 TMPRSS6Q8IU80 811 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 SYNPOQ8N3V7 929 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 PTPRN2Q92932 1015 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 MRPL4Q9BYD3 311 aaKnown RBP5.13□□□□□ -1.59
PALB2-204ENST00000566069 WDR26Q9H7D7 661 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 IPPKQ9H8X2 491 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 ASXL2Q76L83 1435 aa5.13□□□□□ -1.59
PALB2-204ENST00000566069 TLDC2A0PJX2 215 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 BLACEA4D250 179 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 ENPP3O14638 875 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 KCNQ1P51787 676 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 GPR85P60893 370 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 STILQ15468 1287 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 TRIM61Q5EBN2 209 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 BTBD8Q5XKL5 378 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 SGMS1Q86VZ5 419 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.12□□□□□ -1.598e-8■■■■■ 34.1
PALB2-204ENST00000566069 APPBP2Q92624 585 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 WNK4Q96J92 1243 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 NCOA5Q9HCD5 579 aaKnown RBP5.12□□□□□ -1.59
PALB2-204ENST00000566069 AURKAIP1Q9NWT8 199 aaPredicted RBP5.12□□□□□ -1.59
PALB2-204ENST00000566069 SFMBT1Q9UHJ3 866 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 CDC42EP3Q9UKI2 254 aa5.12□□□□□ -1.59
PALB2-204ENST00000566069 AQP7O14520 342 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 PLD2O14939 933 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 FOXN1O15353 648 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 EFCAB14O75071 495 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 PPFIA2O75334 1257 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 CDC45O75419 566 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 PTPN1P18031 435 aaKnown RBP5.11□□□□□ -1.59
PALB2-204ENST00000566069 ADCY8P40145 1251 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 SLC25A3Q00325 362 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 HGFACQ04756 655 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 PCOLCEQ15113 449 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 C16orf86Q6ZW13 317 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 RPUSD2Q8IZ73 545 aaKnown RBP5.11□□□□□ -1.59
PALB2-204ENST00000566069 IFNL3Q8IZI9 196 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 PRRX2Q99811 253 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 TTPALQ9BTX7 342 aa5.11□□□□□ -1.59
PALB2-204ENST00000566069 MSL2Q9HCI7 577 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms