RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 PSRC1Q6PGN9 363 aaPredicted RBP23.6■■□□□ 1.37
SHCBP1-205ENST00000566016 DTHD1Q6ZMT9 781 aa23.6■■□□□ 1.37
SHCBP1-205ENST00000566016 RPUSD2Q8IZ73 545 aaKnown RBP23.6■■□□□ 1.37
SHCBP1-205ENST00000566016 POLR3CQ9BUI4 534 aaPredicted RBP23.6■■□□□ 1.37
SHCBP1-205ENST00000566016 MUTP22033 750 aa23.59■■□□□ 1.37
SHCBP1-205ENST00000566016 EPHB4P54760 987 aa23.59■■□□□ 1.37
SHCBP1-205ENST00000566016 TDHQ8IZJ6 230 aa23.59■■□□□ 1.37
SHCBP1-205ENST00000566016 NME8Q8N427 588 aa23.59■■□□□ 1.37
SHCBP1-205ENST00000566016 VWCEQ96DN2 955 aa23.59■■□□□ 1.37
SHCBP1-205ENST00000566016 CEP89Q96ST8 783 aa23.59■■□□□ 1.37
SHCBP1-205ENST00000566016 RSPH10B2B2RC85 870 aa23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 CXCL10P02778 98 aa23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 RSPH10BP0C881 870 aa23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 ZSCAN22P10073 491 aaPredicted RBP23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 RPA1P27694 616 aa23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 YWHABP31946 246 aaKnown RBP23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 CTTNQ14247 550 aaKnown RBP23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 TRMT1LQ7Z2T5 733 aaKnown RBP23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 SPRYD3Q8NCJ5 442 aa23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 DNAJB3Q8WWF6 145 aa23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 LRWD1Q9UFC0 647 aa23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 MORC2Q9Y6X9 1032 aaPredicted RBP23.58■■□□□ 1.37
SHCBP1-205ENST00000566016 SPATA31C1P0DKV0 1188 aa23.57■■□□□ 1.36
SHCBP1-205ENST00000566016 TBC1D8BQ0IIM8 1120 aa23.57■■□□□ 1.36
SHCBP1-205ENST00000566016 SF3A1Q15459 793 aaKnown RBP23.57■■□□□ 1.36
SHCBP1-205ENST00000566016 C16orf59Q7L2K0 433 aa23.57■■□□□ 1.36
SHCBP1-205ENST00000566016 OTUD6AQ7L8S5 288 aa23.57■■□□□ 1.36
SHCBP1-205ENST00000566016 TPH2Q8IWU9 490 aa23.57■■□□□ 1.36
SHCBP1-205ENST00000566016 LINC01465Q8N7H1 131 aa23.57■■□□□ 1.36
SHCBP1-205ENST00000566016 ZBTB10Q96DT7 871 aa23.57■■□□□ 1.36
SHCBP1-205ENST00000566016 CYP26B1Q9NR63 512 aa23.57■■□□□ 1.36
SHCBP1-205ENST00000566016 DDX11L8A8MPP1 907 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 MGAT3Q09327 533 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 MBTPS1Q14703 1052 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 GPNMBQ14956 572 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 IL17AQ16552 155 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 IER5Q5VY09 327 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 CATSPER3Q86XQ3 398 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 EXOC8Q8IYI6 725 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 ZNF710Q8N1W2 664 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 JPH2Q9BR39 696 aaPredicted RBP23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 ANKEF1Q9NU02 776 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 KDM3AQ9Y4C1 1321 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 MICAL3Q7RTP6 2002 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 IGKV6-21A0A0C4DH24 114 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 NBNO60934 754 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 F13A1P00488 732 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 XRCC6P12956 609 aaKnown RBP eCLIP23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 TMOD1P28289 359 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 MRPS6P82932 125 aaKnown RBP23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 MTERF2Q49AM1 385 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 TMEM240Q5SV17 173 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 KIAA0319LQ8IZA0 1049 aa23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.56■■□□□ 1.363e-6■■■■□ 22.3
SHCBP1-205ENST00000566016 FAM49AQ9H0Q0 323 aaPredicted RBP23.56■■□□□ 1.36
SHCBP1-205ENST00000566016 TMEM150BA6NC51 233 aa23.55■■□□□ 1.36
SHCBP1-205ENST00000566016 MED24O75448 989 aa23.55■■□□□ 1.36
SHCBP1-205ENST00000566016 CTSHP09668 335 aa23.55■■□□□ 1.36
SHCBP1-205ENST00000566016 PKP1Q13835 747 aa23.55■■□□□ 1.36
SHCBP1-205ENST00000566016 PTPAQ15257 358 aa23.55■■□□□ 1.36
SHCBP1-205ENST00000566016 PLA2G4FQ68DD2 849 aa23.55■■□□□ 1.36
SHCBP1-205ENST00000566016 FAM173BQ6P4H8 233 aa23.55■■□□□ 1.36
SHCBP1-205ENST00000566016 AK8Q96MA6 479 aa23.55■■□□□ 1.36
SHCBP1-205ENST00000566016 MAFO75444 373 aaPredicted RBP23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 CHRNA1P02708 482 aa23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 RFC5P40937 340 aa23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 C9orf50Q5SZB4 431 aa23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 EFCAB12Q6NXP0 572 aa23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 ZNF365Q70YC5 407 aa23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 METTL13Q8N6R0 699 aa23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 CEP170P1Q96L14 293 aa23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 DHX33Q9H6R0 707 aaKnown RBP23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 CLIC4Q9Y696 253 aa23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 SQORQ9Y6N5 450 aa23.54■■□□□ 1.36
SHCBP1-205ENST00000566016 VWA3AA6NCI4 1184 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 M0QZ92 97 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 GAS2O43903 313 aaKnown RBP23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 ACRP10323 421 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 SHHQ15465 462 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 RASIP1Q5U651 963 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 KRT79Q5XKE5 535 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 DEFB128Q7Z7B8 93 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 SNX29Q8TEQ0 813 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 SLC7A3Q8WY07 619 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 HERVK_113Q902F9 699 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 NACC1Q96RE7 527 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 USP28Q96RU2 1077 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 MAP7D2Q96T17 732 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 FTOQ9C0B1 505 aaKnown RBP eCLIP23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 MTIF3Q9H2K0 278 aaKnown RBP23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 TRPV2Q9Y5S1 764 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 CDY2AQ9Y6F7 541 aa23.53■■□□□ 1.36
SHCBP1-205ENST00000566016 FGBP02675 491 aa23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 ACTN1P12814 892 aa23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 CCT6AP40227 531 aaKnown RBP23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 NASPP49321 788 aaPredicted RBP23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 CLCN3P51790 818 aa23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 NPEPPSP55786 919 aa23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 POTEGQ6S5H5 508 aa23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 KCTD17Q8N5Z5 321 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms