RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 NPLOC4Q8TAT6 608 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 BHMT2Q9H2M3 363 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 MLXIPQ9HAP2 919 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 ANKEF1Q9NU02 776 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 EXOC1Q9NV70 894 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 MYH9P35579 1960 aaKnown RBP21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 SMTNL1A8MU46 457 aa21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 GGPS1O95749 300 aa21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 SNAI1O95863 264 aaPredicted RBP21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 ERCC5P28715 1186 aaPredicted RBP21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 IQCB1Q15051 598 aa21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 LRRC26Q2I0M4 334 aa21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 CELF3Q5SZQ8 465 aaKnown RBP21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 OLFML2BQ68BL8 750 aa21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 TAPT1Q6NXT6 567 aa21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 CCDC65Q8IXS2 484 aa21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 DNAJC19Q96DA6 116 aa21.21■□□□□ 0.99
CSPG4P13-201ENST00000565545 ALPK3Q96L96 1907 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 A0A087WWV3 80 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 BECN2A8MW95 431 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 IKBKBO14920 756 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 KRT18P05783 430 aaKnown RBP21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 TXNP10599 105 aaKnown RBP21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 CNGA1P29973 690 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 OTUD6AQ7L8S5 288 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 DYMQ7RTS9 669 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 PIGOQ8TEQ8 1089 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 SEPT1Q8WYJ6 367 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 LBHD1Q9BQE6 289 aaPredicted RBP21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 SENP6Q9GZR1 1112 aaPredicted RBP21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 KATNBL1Q9H079 304 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 WRAP73Q9P2S5 460 aaPredicted RBP21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 GABBR1Q9UBS5 961 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 STXBP5LQ9Y2K9 1186 aa21.2■□□□□ 0.98
CSPG4P13-201ENST00000565545 IGKV6D-21A0A0A0MT36 114 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 FRMD3A2A2Y4 597 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 ARHGEF35A5YM69 484 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 GOLGA6L19H0YKK7 550 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 NKRFO15226 690 aaKnown RBP eCLIP21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 ARIH2O95376 493 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 YWHABP31946 246 aaKnown RBP21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 STIM1Q13586 685 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 LY6KQ17RY6 165 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 COBLL1Q53SF7 1204 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 ARSHQ5FYA8 562 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 RINT1Q6NUQ1 792 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 SWSAP1Q6NVH7 229 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 DHX37Q8IY37 1157 aaKnown RBP21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 BCAS3Q9H6U6 928 aa21.19■□□□□ 0.98
CSPG4P13-201ENST00000565545 GSTTP1A0A1W2PQM5 241 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 IDEP14735 1019 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 EHHADHQ08426 723 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 ACVR2BQ13705 512 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 LAMC2Q13753 1193 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 GIT2Q14161 759 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 FAM160B1Q5W0V3 765 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 IQSEC1Q6DN90 963 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 C1orf186Q6ZWK4 172 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 EMID1Q96A84 441 aaPredicted RBP21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 TIPINQ9BVW5 301 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 ZNF302Q9NR11 478 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 PANK4Q9NVE7 773 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 MTMR10Q9NXD2 777 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 MAFBQ9Y5Q3 323 aaPredicted RBP21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 IGSF9BQ9UPX0 1349 aa21.18■□□□□ 0.98
CSPG4P13-201ENST00000565545 PPP1R3GB7ZBB8 358 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 BACH1O14867 736 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 GH1P01241 217 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 GAP43P17677 238 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 GUCY2CP25092 1073 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 TPM4P67936 248 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 SP4Q02446 784 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 UGCGQ16739 394 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 LUZP1Q86V48 1076 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 DHX40Q8IX18 779 aaKnown RBP21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 AFAP1L1Q8TED9 768 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 ANP32BQ92688 251 aaKnown RBP21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 CCDC43Q96MW1 224 aaKnown RBP21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 PDGFCQ9NRA1 345 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 FLRT1Q9NZU1 646 aa21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 DDX20Q9UHI6 824 aaKnown RBP21.17■□□□□ 0.98
CSPG4P13-201ENST00000565545 LAMA3Q16787 3333 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 NOP56O00567 594 aaKnown RBP21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 MSCO60682 206 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 RARRES1P49788 294 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 ATN1P54259 1190 aaPredicted RBP21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 MYL5Q02045 173 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 COASYQ13057 564 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 XKR3Q5GH77 459 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 PADI6Q6TGC4 694 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 CCDC60Q8IWA6 550 aaPredicted RBP21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 ENOX1Q8TC92 643 aaKnown RBP21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 DHTKD1Q96HY7 919 aaPredicted RBP21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 GPR20Q99678 358 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 RUSC1Q9BVN2 902 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 NRBP1Q9UHY1 535 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 ODF2LQ9ULJ1 636 aa21.16■□□□□ 0.98
CSPG4P13-201ENST00000565545 ZBTB39O15060 712 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 TBCAO75347 108 aaKnown RBP21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 LGR5O75473 907 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms