RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CDC42EP3Q9UKI2 254 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 ASB1Q9Y576 335 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 FAM83GA6ND36 823 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 KPNA6O60684 536 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 CNOT4O95628 575 aaKnown RBP7.09□□□□□ -1.27
UBR1-205ENST00000564540 KCNQ1P51787 676 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 EPHB4P54760 987 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 RRADP55042 308 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 GLB1LQ6UWU2 654 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 RTN4RL1Q86UN2 441 aaPredicted RBP7.09□□□□□ -1.27
UBR1-205ENST00000564540 DHX37Q8IY37 1157 aaKnown RBP7.09□□□□□ -1.27
UBR1-205ENST00000564540 CARD11Q9BXL7 1154 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 ZDHHC5Q9C0B5 715 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 MEGF9Q9H1U4 602 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 INTS7Q9NVH2 962 aaKnown RBP7.09□□□□□ -1.27
UBR1-205ENST00000564540 B4GALT6Q9UBX8 382 aa7.09□□□□□ -1.27
UBR1-205ENST00000564540 NPEPPSL1A6NEC2 478 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 CUTAO60888 179 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 ETV4P43268 484 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 RANGAP1P46060 587 aaPredicted RBP7.08□□□□□ -1.28
UBR1-205ENST00000564540 CXXC5Q7LFL8 322 aaKnown RBP7.08□□□□□ -1.28
UBR1-205ENST00000564540 OTOP2Q7RTS6 562 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 LRRTM3Q86VH5 581 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 KIAA1958Q8N8K9 716 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 WDR48Q8TAF3 677 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 NINJ1Q92982 152 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 LOXL4Q96JB6 756 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 KIAA1683Q9H0B3 1180 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 TMPRSS5Q9H3S3 457 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 PCIF1Q9H4Z3 704 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 CNOT11Q9UKZ1 510 aaKnown RBP7.08□□□□□ -1.28
UBR1-205ENST00000564540 SLC4A7Q9Y6M7 1214 aa7.08□□□□□ -1.28
UBR1-205ENST00000564540 H7C1D1 291 aa7.07□□□□□ -1.28
UBR1-205ENST00000564540 GPR42O15529 346 aa7.07□□□□□ -1.28
UBR1-205ENST00000564540 HMGCRP04035 888 aa7.07□□□□□ -1.28
UBR1-205ENST00000564540 ADRB1P08588 477 aa7.07□□□□□ -1.28
UBR1-205ENST00000564540 PTX3P26022 381 aaPredicted RBP7.07□□□□□ -1.28
UBR1-205ENST00000564540 NEK4P51957 841 aa7.07□□□□□ -1.28
UBR1-205ENST00000564540 NOLC1Q14978 699 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBR1-205ENST00000564540 SPATS1Q496A3 300 aa7.07□□□□□ -1.28
UBR1-205ENST00000564540 CNNM4Q6P4Q7 775 aa7.07□□□□□ -1.28
UBR1-205ENST00000564540 LARP4Q71RC2 724 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBR1-205ENST00000564540 IFNL2Q8IZJ0 200 aa7.07□□□□□ -1.28
UBR1-205ENST00000564540 SMPD4Q9NXE4 827 aa7.07□□□□□ -1.28
UBR1-205ENST00000564540 SLC9A1P19634 815 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 ALDH6A1Q02252 535 aaKnown RBP7.06□□□□□ -1.28
UBR1-205ENST00000564540 MOGSQ13724 837 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 EIF4HQ15056 248 aaKnown RBP7.06□□□□□ -1.28
UBR1-205ENST00000564540 ZNF827Q17R98 1081 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 CREB3L3Q68CJ9 461 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 SLFN13Q68D06 897 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 NIM1KQ8IY84 436 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 NXPE1Q8N323 547 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 C8orf49Q96NF6 230 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 GNRHR2Q96P88 292 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 LRRC37BQ96QE4 947 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 FEZ1Q99689 392 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 MTFR1LQ9H019 292 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 H2AFY2Q9P0M6 372 aaPredicted RBP7.06□□□□□ -1.28
UBR1-205ENST00000564540 ST6GALNAC2Q9UJ37 374 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 FBXO10Q9UK96 956 aa7.06□□□□□ -1.28
UBR1-205ENST00000564540 A0A0G2JNJ9 132 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 ZNF891A8MT65 544 aaPredicted RBP7.05□□□□□ -1.28
UBR1-205ENST00000564540 ATP2A2P16615 1042 aaKnown RBP7.05□□□□□ -1.28
UBR1-205ENST00000564540 MAGEA10P43363 369 aaPredicted RBP7.05□□□□□ -1.28
UBR1-205ENST00000564540 FNTBP49356 437 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 RGS3P49796 1198 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 ZNF174Q15697 407 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 RNF151Q2KHN1 245 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 DALRD3Q5D0E6 543 aaKnown RBP7.05□□□□□ -1.28
UBR1-205ENST00000564540 GRAMD4Q6IC98 578 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 CIR1Q86X95 450 aaPredicted RBP7.05□□□□□ -1.28
UBR1-205ENST00000564540 CALML6Q8TD86 181 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 SAMD11Q96NU1 681 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 LMF1Q96S06 567 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 ELF4Q99607 663 aaPredicted RBP7.05□□□□□ -1.28
UBR1-205ENST00000564540 FOXB1Q99853 325 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 ACSS2Q9NR19 701 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 OXSMQ9NWU1 459 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 Q9UFV3 132 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 TBX22Q9Y458 520 aa7.05□□□□□ -1.28
UBR1-205ENST00000564540 PRLP01236 227 aa7.04□□□□□ -1.28
UBR1-205ENST00000564540 APEX1P27695 318 aaKnown RBP7.04□□□□□ -1.28
UBR1-205ENST00000564540 STAT5BP51692 787 aa7.04□□□□□ -1.28
UBR1-205ENST00000564540 SLC6A3Q01959 620 aa7.04□□□□□ -1.28
UBR1-205ENST00000564540 ICAM4Q14773 271 aa7.04□□□□□ -1.28
UBR1-205ENST00000564540 PCBP1Q15365 356 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBR1-205ENST00000564540 TBR1Q16650 682 aa7.04□□□□□ -1.28
UBR1-205ENST00000564540 TMEM200BQ69YZ2 307 aa7.04□□□□□ -1.28
UBR1-205ENST00000564540 KIAA0907Q7Z7F0 614 aaPredicted RBP7.04□□□□□ -1.28
UBR1-205ENST00000564540 NOP9Q86U38 636 aaKnown RBP7.04□□□□□ -1.28
UBR1-205ENST00000564540 NEIL1Q96FI4 390 aaPredicted RBP7.04□□□□□ -1.28
UBR1-205ENST00000564540 C16orf92Q96LL3 132 aa7.04□□□□□ -1.28
UBR1-205ENST00000564540 ORAI3Q9BRQ5 295 aa7.04□□□□□ -1.28
UBR1-205ENST00000564540 TARS2Q9BW92 718 aaKnown RBP7.04□□□□□ -1.28
UBR1-205ENST00000564540 MAGEL2Q9UJ55 1249 aa7.04□□□□□ -1.28
UBR1-205ENST00000564540 F2P00734 622 aa7.03□□□□□ -1.28
UBR1-205ENST00000564540 CYP17A1P05093 508 aa7.03□□□□□ -1.28
UBR1-205ENST00000564540 POU3F2P20265 443 aaPredicted RBP7.03□□□□□ -1.28
UBR1-205ENST00000564540 PCOLCEQ15113 449 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms