RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 SPATA25Q9BR10 227 aa4.78□□□□□ -1.64
ATP2A1-207ENST00000564470 BCAS3Q9H6U6 928 aa4.78□□□□□ -1.64
ATP2A1-207ENST00000564470 PCDHB10Q9UN67 800 aa4.78□□□□□ -1.64
ATP2A1-207ENST00000564470 RWDD3Q9Y3V2 267 aa4.78□□□□□ -1.64
ATP2A1-207ENST00000564470 CNTNAP1P78357 1384 aa4.78□□□□□ -1.64
ATP2A1-207ENST00000564470 KIF24Q5T7B8 1368 aa4.78□□□□□ -1.64
ATP2A1-207ENST00000564470 U2SURPO15042 1029 aaKnown RBP4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 MAFGO15525 162 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 RAB11FIP3O75154 756 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 PPM1BO75688 479 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 ADRB1P08588 477 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 ZNF853P0CG23 659 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 FBLN1P23142 703 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 MC3RP41968 323 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 SEPHS1P49903 392 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 RARSP54136 660 aaKnown RBP4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 RIPK4P57078 832 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 ANAPC15P60006 121 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 RACK1P63244 317 aaKnown RBP4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 NFE2L2Q16236 605 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 EEF1DP3Q658K8 133 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 LIPIQ6XZB0 460 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 CPNE8Q86YQ8 564 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 EXOC6Q8TAG9 804 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 DDX1Q92499 740 aaKnown RBP4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 FGD4Q96M96 766 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 MCMBPQ9BTE3 642 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 RNF38Q9H0F5 515 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 GBP3Q9H0R5 595 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 METTL5Q9NRN9 209 aaKnown RBP4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 GINM1Q9NU53 330 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 WHRNQ9P202 907 aa4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 DDX41Q9UJV9 622 aaKnown RBP4.77□□□□□ -1.65
ATP2A1-207ENST00000564470 ITGB4P16144 1822 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 C2orf71A6NGG8 1288 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 STXBP3O00186 592 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 AURKAO14965 403 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 CBFA2T2O43439 604 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 MMP10P09238 476 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 GLI4P10075 376 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 LBX1P52954 281 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 EIF6P56537 245 aaKnown RBP4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 NFKB2Q00653 900 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 CALD1Q05682 793 aaKnown RBP4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 EIF4A2Q14240 407 aaKnown RBP4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 PPP2R5EQ16537 467 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 VWA3BQ502W6 1294 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 DALRD3Q5D0E6 543 aaKnown RBP4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 RCSD1Q6JBY9 416 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 DPH6Q7L8W6 267 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 SAPCD2Q86UD0 394 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 PHACTR3Q96KR7 559 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 HAUS7Q99871 368 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 NUDT5Q9UKK9 219 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 EFR3BQ9Y2G0 817 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 SLC12A7Q9Y666 1083 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 DICER1Q9UPY3 1922 aaKnown RBP4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 DLEC1Q9Y238 1755 aa4.76□□□□□ -1.65
ATP2A1-207ENST00000564470 THSD7BQ9C0I4 1608 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PCDH11XQ9BZA7 1347 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PCDH11YQ9BZA8 1340 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 MAPK8IP3Q9UPT6 1336 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 CCDC88AQ3V6T2 1871 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 SCN4AP35499 1836 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 GLTPD2A6NH11 291 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 HTATSF1O43719 755 aaKnown RBP4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PLIN1O60240 522 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PPP1R11O60927 126 aaPredicted RBP4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 BCAR3O75815 825 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PMLP29590 882 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PRKAR2BP31323 418 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 SLC7A5Q01650 507 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 LMOD3Q0VAK6 560 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PAK2Q13177 524 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 COL9A2Q14055 689 aaPredicted RBP4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 RRS1Q15050 365 aaKnown RBP4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 ZFYVE27Q5T4F4 411 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 B3GNT8Q7Z7M8 397 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 ZNF654Q8IZM8 581 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 BORCS6Q96GS4 357 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PEX11GQ96HA9 241 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 KLHL25Q9H0H3 589 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PHAXQ9H814 394 aaKnown RBP4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 IFT57Q9NWB7 429 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 GULP1Q9UBP9 304 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 RRP7AQ9Y3A4 280 aaKnown RBP4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 ZNF831Q5JPB2 1677 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 PDE4DIPQ5VU43 2346 aa4.75□□□□□ -1.65
ATP2A1-207ENST00000564470 MAP3K19Q56UN5 1328 aa4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 NPHP3-ACAD11A0A0J9YXS1 232 aa4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 SH3D21A4FU49 640 aa4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 IQCA1LA6NCM1 817 aa4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 K7ESM1 405 aa4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 CHL1O00533 1208 aa4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 CA12O43570 354 aa4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 FUCA1P04066 466 aa4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 EPHX1P07099 455 aa4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 HSPA8P11142 646 aaKnown RBP4.74□□□□□ -1.65
ATP2A1-207ENST00000564470 PAMP19021 973 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 268.1 ms