RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 PSAPP07602 524 aa19.51■□□□□ 0.71
VPS9D1-203ENST00000563798 TRIM22Q8IYM9 498 aa19.51■□□□□ 0.71
VPS9D1-203ENST00000563798 CMTR2Q8IYT2 770 aaKnown RBP19.51■□□□□ 0.71
VPS9D1-203ENST00000563798 BANK1Q8NDB2 785 aa19.51■□□□□ 0.71
VPS9D1-203ENST00000563798 RIT2Q99578 217 aa19.51■□□□□ 0.71
VPS9D1-203ENST00000563798 PLVAPQ9BX97 442 aa19.51■□□□□ 0.71
VPS9D1-203ENST00000563798 C22orf23Q9BZE7 217 aa19.51■□□□□ 0.71
VPS9D1-203ENST00000563798 BRWD1Q9NSI6 2320 aa19.51■□□□□ 0.71
VPS9D1-203ENST00000563798 STAG3L1P0CL83 205 aa19.5■□□□□ 0.71
VPS9D1-203ENST00000563798 CTNNB1P35222 781 aa19.5■□□□□ 0.71
VPS9D1-203ENST00000563798 BTG3Q14201 252 aaPredicted RBP19.5■□□□□ 0.71
VPS9D1-203ENST00000563798 ODR4Q5SWX8 454 aa19.5■□□□□ 0.71
VPS9D1-203ENST00000563798 NEK9Q8TD19 979 aa19.5■□□□□ 0.71
VPS9D1-203ENST00000563798 NSUN3Q9H649 340 aaKnown RBP19.5■□□□□ 0.71
VPS9D1-203ENST00000563798 ERVK-5Q9HDB9 667 aa19.5■□□□□ 0.71
VPS9D1-203ENST00000563798 CEP131Q9UPN4 1083 aa19.5■□□□□ 0.71
VPS9D1-203ENST00000563798 WDR64B1ANS9 1081 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 M0R2N6 131 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 MSH4O15457 936 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 PPFIA3O75145 1194 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 DEXIO95424 95 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 SSRP1Q08945 709 aaKnown RBP19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 NAALADL2Q58DX5 795 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 GALNT17Q6IS24 598 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 ZNF710Q8N1W2 664 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 DAGLBQ8NCG7 672 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 SLC5A5Q92911 643 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 P2RX5Q93086 422 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 PABPC5Q96DU9 382 aaKnown RBP19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 FAM167AQ96KS9 214 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 TCEAL9Q9UHQ7 104 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 PCDHA4Q9UN74 947 aa19.49■□□□□ 0.71
VPS9D1-203ENST00000563798 CYP3A7-CYP3A51PA0A087WV96 503 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 MAGEB2O15479 319 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 NCK2O43639 380 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 CYP3A7P24462 503 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 CRYBB1P53674 252 aaPredicted RBP19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 NLRP5P59047 1200 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 PUS10Q3MIT2 529 aaKnown RBP19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 Q4G0T1 1027 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 TCEAL5Q5H9L2 206 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 LINC01465Q8N7H1 131 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 TMEM40Q8WWA1 233 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 UIMC1Q96RL1 719 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 CDHR5Q9HBB8 845 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 RNF216Q9NWF9 866 aaPredicted RBP19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 GABBR1Q9UBS5 961 aa19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 NOC2LQ9Y3T9 749 aaKnown RBP19.48■□□□□ 0.71
VPS9D1-203ENST00000563798 GRM6O15303 877 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 GPR32O75388 356 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 RPS6KA5O75582 802 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 MMP1P03956 469 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 KCNA5P22460 613 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 SFNP31947 248 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 SARSP49591 514 aaKnown RBP19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 NPY5RQ15761 445 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 TMEM266Q2M3C6 531 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 MOXD1Q6UVY6 613 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 CKAP2LQ8IYA6 745 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 RDM1Q8NG50 284 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 MBOAT7Q96N66 472 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 DISC1Q9NRI5 854 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 RGS18Q9NS28 235 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 C1orf112Q9NSG2 853 aa19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 MRPL42Q9Y6G3 142 aaKnown RBP19.47■□□□□ 0.71
VPS9D1-203ENST00000563798 CPLX1O14810 134 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 GPR182O15218 404 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 ZNF862O60290 1169 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 PSMD10O75832 226 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 JAK3P52333 1124 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 NFX1Q12986 1120 aaKnown RBP19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 CPLX2Q6PUV4 134 aaKnown RBP19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 B3GNT9Q6UX72 402 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 TBCKQ8TEA7 893 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 C1QTNF1Q9BXJ1 281 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 UPF3BQ9BZI7 483 aaKnown RBP19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 NRBP2Q9NSY0 501 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 ST3GAL5Q9UNP4 418 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 PLAGL2Q9UPG8 496 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 LOXHD1Q8IVV2 1947 aa19.46■□□□□ 0.71
VPS9D1-203ENST00000563798 MYH9P35579 1960 aaKnown RBP19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 GRXCR2A6NFK2 248 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 C9IYK1 514 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 MGEA5O60502 916 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 GAS7O60861 476 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 OATP04181 439 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 FAM189BP81408 668 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 CAMK1Q14012 370 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 CTC1Q2NKJ3 1217 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 SLC24A5Q71RS6 500 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 FAM178BQ8IXR5 827 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 BLIDQ8IZY5 108 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 PDRG1Q9NUG6 133 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 SAMM50Q9Y512 469 aa19.45■□□□□ 0.7
VPS9D1-203ENST00000563798 DSC3Q14574 896 aa19.44■□□□□ 0.7
VPS9D1-203ENST00000563798 KIZQ2M2Z5 673 aa19.44■□□□□ 0.7
VPS9D1-203ENST00000563798 LRCH2Q5VUJ6 765 aa19.44■□□□□ 0.7
VPS9D1-203ENST00000563798 FAM228AQ86W67 206 aa19.44■□□□□ 0.7
VPS9D1-203ENST00000563798 ADAM2Q99965 735 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms