RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 FRMD6Q96NE9 622 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 PIGSQ96S52 555 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 SLC26A6Q9BXS9 759 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 RNF26Q9BY78 433 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 ACBD3Q9H3P7 528 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 PIF1Q9H611 641 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 RAVER2Q9HCJ3 691 aaKnown RBP5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 VAT1LQ9HCJ6 419 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 RNF186Q9NXI6 227 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 HOXC10Q9NYD6 342 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 VTI1BQ9UEU0 232 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 RABGAP1Q9Y3P9 1069 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 STK36Q9NRP7 1315 aa5.99□□□□□ -1.45
HERPUD1-207ENST00000563781 PNMA6FA0A0J9YX94 578 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 J3QW42 95 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 STXBP3O00186 592 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 CPLX1O14810 134 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 ZBTB5O15062 677 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 GPR182O15218 404 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 PRPF3O43395 683 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 DHX16O60231 1041 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 TLR2O60603 784 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 ZBED4O75132 1171 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 ICAM1P05362 532 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 SCG2P13521 617 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 GCLCP48506 637 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 OAZ1P54368 228 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 ERVK-24P63145 666 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 CAP1Q01518 475 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 MLLT1Q03111 559 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 ENOX2Q16206 610 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 PFKFB3Q16875 520 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 FAM110CQ1W6H9 321 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 WWC2Q6AWC2 1192 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 ALG1LQ6GMV1 187 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 OTUD7BQ6GQQ9 843 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 KANK3Q6NY19 840 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 CPLX2Q6PUV4 134 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 HFE2Q6ZVN8 426 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 FBXO11Q86XK2 927 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 HOMER1Q86YM7 354 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 MB21D1Q8N884 522 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 JMYQ8N9B5 988 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 SMCR8Q8TEV9 937 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 CLEC4DQ8WXI8 215 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 RRP36Q96EU6 259 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 DDX11Q96FC9 970 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 FAM161BQ96MY7 647 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 AIFM3Q96NN9 605 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 NSUN5Q96P11 429 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 LLPHQ9BRT6 129 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 PAGR1Q9BTK6 254 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 MOV10L1Q9BXT6 1211 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 TEX13BQ9BXU2 312 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 SPATC1LQ9H0A9 340 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 PORCNQ9H237 461 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 CHRDQ9H2X0 955 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 ZFYVE28Q9HCC9 887 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 METTL14Q9HCE5 456 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 ORC3Q9UBD5 711 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 STK17AQ9UEE5 414 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 CPA4Q9UI42 421 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 FOXD3Q9UJU5 478 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 NAGPAQ9UK23 515 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 RIPK3Q9Y572 518 aa5.98□□□□□ -1.45
HERPUD1-207ENST00000563781 FAM181BA6NEQ2 426 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 ADAMTS3O15072 1205 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 MARCH6O60337 910 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 TRPA1O75762 1119 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 CDKL5O76039 1030 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 DEXIO95424 95 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 TBC1D8O95759 1140 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 CPB1P15086 417 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 AMPD1P23109 780 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 CES1P23141 567 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 CTGFP29279 349 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 GNA15P30679 374 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 STAT3P40763 770 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 SNRPNP63162 240 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 HMGN5P82970 282 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 GHRHRQ02643 423 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 MAP2K1Q02750 393 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 SSRP1Q08945 709 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 HYAL2Q12891 473 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 NPY5RQ15761 445 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 USH1GQ495M9 461 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 MUM1L1Q5H9M0 696 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 SNRNP48Q6IEG0 339 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 FAM35AQ86V20 835 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 RIOX2Q8IUF8 465 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 CPXCR1Q8N123 301 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 MICALL1Q8N3F8 863 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 ANKRD13CQ8N6S4 541 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 SHCBP1Q8NEM2 672 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 GPRC5AQ8NFJ5 357 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 SNX29Q8TEQ0 813 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 FBF1Q8TES7 1133 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 PMEPA1Q969W9 287 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 COA7Q96BR5 231 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms