RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HECW1Q76N89 1606 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 FOXP2O15409 715 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 KRT37O76014 449 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 CTSWP56202 376 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 RTP5Q14D33 572 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 TMEM132BQ14DG7 1078 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 C21orf62-AS1Q17RA5 79 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 PHF19Q5T6S3 580 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 ERICH6BQ5W0A0 696 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 LRRTM3Q86VH5 581 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 AHI1Q8N157 1196 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 PPM1KQ8N3J5 372 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 STPG3Q8N7X2 389 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 HIPK4Q8NE63 616 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 DLG3Q92796 817 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 MFSD3Q96ES6 412 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 YTHDC1Q96MU7 727 aaKnown RBP6.92□□□□□ -1.3
LINC00254-201ENST00000563416 TEPSINQ96N21 525 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 TACO1Q9BSH4 297 aaKnown RBP6.92□□□□□ -1.3
LINC00254-201ENST00000563416 SLKQ9H2G2 1235 aaPredicted RBP6.92□□□□□ -1.3
LINC00254-201ENST00000563416 PCIF1Q9H4Z3 704 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 INCENPQ9NQS7 918 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 RTEL1Q9NZ71 1219 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 ZKSCAN5Q9Y2L8 839 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 ASB1Q9Y576 335 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 FHOD3Q2V2M9 1422 aa6.92□□□□□ -1.3
LINC00254-201ENST00000563416 PTPDC1A2A3K4 754 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 H0Y858 1186 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 H7C1D1 291 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 CLSTN1O94985 981 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 ZNF174Q15697 407 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 PLEKHG4Q58EX7 1191 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 DALRD3Q5D0E6 543 aaKnown RBP6.91□□□□□ -1.3
LINC00254-201ENST00000563416 CC2D1AQ6P1N0 951 aaPredicted RBP6.91□□□□□ -1.3
LINC00254-201ENST00000563416 CNNM4Q6P4Q7 775 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 LGI4Q8N135 537 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 KLHL36Q8N4N3 616 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 GBP4Q96PP9 640 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 GALNT8Q9NY28 637 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 B4GALT6Q9UBX8 382 aa6.91□□□□□ -1.3
LINC00254-201ENST00000563416 NUP153P49790 1475 aaKnown RBP6.91□□□□□ -1.3
LINC00254-201ENST00000563416 ABCA9Q8IUA7 1624 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 CBX4O00257 560 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 TRAF5O00463 557 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 GAS7O60861 476 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 KNG1P01042 644 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 MMEP08473 750 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
LINC00254-201ENST00000563416 POU3F2P20265 443 aaPredicted RBP6.9□□□□□ -1.3
LINC00254-201ENST00000563416 KIF11P52732 1056 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 NFIXQ14938 502 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 SEC23AQ15436 765 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 GIMAP6Q6P9H5 292 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 PLEKHH3Q7Z736 793 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 KIF18BQ86Y91 864 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.3
LINC00254-201ENST00000563416 ASB15Q8WXK1 588 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 DDX1Q92499 740 aaKnown RBP6.9□□□□□ -1.3
LINC00254-201ENST00000563416 E2F7Q96AV8 911 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 ORAI3Q9BRQ5 295 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 ACSS2Q9NR19 701 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 BTBD7Q9P203 1132 aa6.9□□□□□ -1.3
LINC00254-201ENST00000563416 WDR7Q9Y4E6 1490 aa6.9□□□□□ -1.31
LINC00254-201ENST00000563416 EPRSP07814 1512 aaKnown RBP6.9□□□□□ -1.31
LINC00254-201ENST00000563416 PCF11O94913 1555 aaKnown RBP6.9□□□□□ -1.31
LINC00254-201ENST00000563416 A0A0G2JLL6 359 aaPredicted RBP6.89□□□□□ -1.31
LINC00254-201ENST00000563416 KPNA6O60684 536 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 IL18BPO95998 194 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 COL6A1P12109 1028 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 HSD3B2P26439 372 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 FNTBP49356 437 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 UBXN11Q5T124 520 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 ZFYVE27Q5T4F4 411 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 SDE2Q6IQ49 451 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 FSTL4Q6MZW2 842 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 CXXC5Q7LFL8 322 aaKnown RBP6.89□□□□□ -1.31
LINC00254-201ENST00000563416 CALML6Q8TD86 181 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 BTBD2Q9BX70 525 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 KRTAP9-9Q9BYP9 154 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 IFT57Q9NWB7 429 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 UCKL1Q9NWZ5 548 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 FBXO10Q9UK96 956 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 ATP10BO94823 1461 aa6.89□□□□□ -1.31
LINC00254-201ENST00000563416 FMN1Q68DA7 1419 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 CUTAO60888 179 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 KLHL18O94889 574 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 CYP17A1P05093 508 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 MC4RP32245 332 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 NFATC3Q12968 1075 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 SART3Q15020 963 aaKnown RBP6.88□□□□□ -1.31
LINC00254-201ENST00000563416 SURF1Q15526 300 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 WDR72Q3MJ13 1102 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 TM4SF20Q53R12 229 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 LILRA6Q6PI73 481 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 REXO1L1PQ8IX06 675 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 ADAM7Q9H2U9 754 aa6.88□□□□□ -1.31
LINC00254-201ENST00000563416 MYO5CQ9NQX4 1742 aa6.87□□□□□ -1.31
LINC00254-201ENST00000563416 TTBK1Q5TCY1 1321 aaPredicted RBP6.87□□□□□ -1.31
LINC00254-201ENST00000563416 PRAMEF22A3QJZ6 481 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms