RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 STBD1O95210 358 aa31.85■■■□□ 2.69
NME3-203ENST00000563367 RPLP2P05387 115 aaKnown RBP31.85■■■□□ 2.69
NME3-203ENST00000563367 FBXO47Q5MNV8 452 aa31.85■■■□□ 2.69
NME3-203ENST00000563367 KIAA0319LQ8IZA0 1049 aa31.85■■■□□ 2.69
NME3-203ENST00000563367 IFIH1Q9BYX4 1025 aaKnown RBP31.85■■■□□ 2.69
NME3-203ENST00000563367 NRBP2Q9NSY0 501 aa31.85■■■□□ 2.69
NME3-203ENST00000563367 MARCH6O60337 910 aa31.84■■■□□ 2.69
NME3-203ENST00000563367 GRIN2CQ14957 1233 aa31.84■■■□□ 2.69
NME3-203ENST00000563367 IER5Q5VY09 327 aa31.84■■■□□ 2.69
NME3-203ENST00000563367 BANK1Q8NDB2 785 aa31.84■■■□□ 2.69
NME3-203ENST00000563367 FOXP1Q9H334 677 aaPredicted RBP31.84■■■□□ 2.69
NME3-203ENST00000563367 TRPV2Q9Y5S1 764 aa31.84■■■□□ 2.69
NME3-203ENST00000563367 MCM2P49736 904 aa31.83■■■□□ 2.69
NME3-203ENST00000563367 SLFN12Q8IYM2 578 aa31.83■■■□□ 2.69
NME3-203ENST00000563367 NME8Q8N427 588 aa31.83■■■□□ 2.69
NME3-203ENST00000563367 CHD7Q9P2D1 2997 aa31.83■■■□□ 2.69
NME3-203ENST00000563367 CEP131Q9UPN4 1083 aa31.83■■■□□ 2.69
NME3-203ENST00000563367 ATP2B1P20020 1258 aa31.82■■■□□ 2.68
NME3-203ENST00000563367 SPIRE1Q08AE8 756 aa31.82■■■□□ 2.68
NME3-203ENST00000563367 CELF4Q9BZC1 486 aaKnown RBP31.82■■■□□ 2.68
NME3-203ENST00000563367 AGO3Q9H9G7 860 aaKnown RBP31.82■■■□□ 2.68
NME3-203ENST00000563367 SLC28A3Q9HAS3 691 aa31.82■■■□□ 2.68
NME3-203ENST00000563367 STXBP5LQ9Y2K9 1186 aa31.82■■■□□ 2.68
NME3-203ENST00000563367 TMEM150BA6NC51 233 aa31.81■■■□□ 2.68
NME3-203ENST00000563367 KIF28PB7ZC32 967 aa31.81■■■□□ 2.68
NME3-203ENST00000563367 BAG4O95429 457 aaKnown RBP31.81■■■□□ 2.68
NME3-203ENST00000563367 CALCRLQ16602 461 aa31.81■■■□□ 2.68
NME3-203ENST00000563367 METTL13Q8N6R0 699 aa31.81■■■□□ 2.68
NME3-203ENST00000563367 APBB2Q92870 758 aa31.81■■■□□ 2.68
NME3-203ENST00000563367 LOC101059915A0A1B0GWI6 518 aaPredicted RBP31.8■■■□□ 2.68
NME3-203ENST00000563367 M0QZ92 97 aa31.8■■■□□ 2.68
NME3-203ENST00000563367 NEMFO60524 1076 aa31.8■■■□□ 2.68
NME3-203ENST00000563367 CA3P07451 260 aa31.8■■■□□ 2.68
NME3-203ENST00000563367 TARBP2Q15633 366 aaKnown RBP31.8■■■□□ 2.68
NME3-203ENST00000563367 TSHZ1Q6ZSZ6 1077 aa31.8■■■□□ 2.68
NME3-203ENST00000563367 MYLIPQ8WY64 445 aa31.8■■■□□ 2.68
NME3-203ENST00000563367 NIFKQ9BYG3 293 aaKnown RBP31.8■■■□□ 2.68
NME3-203ENST00000563367 CDHR5Q9HBB8 845 aa31.8■■■□□ 2.68
NME3-203ENST00000563367 KDM3AQ9Y4C1 1321 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 MAGEB2O15479 319 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 ARHGEF15O94989 841 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 CLCN3P51790 818 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 PSMC5P62195 406 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 XKR3Q5GH77 459 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 NCAPH2Q6IBW4 605 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 LINC01465Q8N7H1 131 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 MTMR9Q96QG7 549 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 CEP89Q96ST8 783 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 TMEM60Q9H2L4 133 aa31.79■■■□□ 2.68
NME3-203ENST00000563367 SEPT9Q9UHD8 586 aaPredicted RBP31.79■■■□□ 2.68
NME3-203ENST00000563367 TLL1O43897 1013 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 GJB5O95377 273 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 AMHP03971 560 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 CD52P31358 61 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 MCM7P33993 719 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 QARSP47897 775 aaKnown RBP31.78■■■□□ 2.68
NME3-203ENST00000563367 EPHA7Q15375 998 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 PPP2R2DQ66LE6 453 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 EFCAB12Q6NXP0 572 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 FAM117BQ6P1L5 589 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 NOSTRINQ8IVI9 506 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 SH2D3AQ9BRG2 576 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 ZBED2Q9BTP6 218 aa31.78■■■□□ 2.68
NME3-203ENST00000563367 WRAP73Q9P2S5 460 aaPredicted RBP31.78■■■□□ 2.68
NME3-203ENST00000563367 DDX11L8A8MPP1 907 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 VTNP04004 478 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 MTERF2Q49AM1 385 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 MYOCDQ8IZQ8 938 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 LRRC71Q8N4P6 559 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 PPP1R16BQ96T49 567 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 TTC12Q9H892 705 aaPredicted RBP31.77■■■□□ 2.68
NME3-203ENST00000563367 RGL1Q9NZL6 768 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 PCDHA12Q9UN75 941 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 GINS2Q9Y248 185 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 SQORQ9Y6N5 450 aa31.77■■■□□ 2.68
NME3-203ENST00000563367 LCHNA4D1U4 455 aa31.76■■■□□ 2.67
NME3-203ENST00000563367 P4HBP07237 508 aaKnown RBP31.76■■■□□ 2.67
NME3-203ENST00000563367 U2AF2P26368 475 aaKnown RBP eCLIP31.76■■■□□ 2.67
NME3-203ENST00000563367 GJB2P29033 226 aa31.76■■■□□ 2.67
NME3-203ENST00000563367 TXKP42681 527 aa31.76■■■□□ 2.67
NME3-203ENST00000563367 GNL2Q13823 731 aaKnown RBP31.76■■■□□ 2.67
NME3-203ENST00000563367 ANO5Q75V66 913 aa31.76■■■□□ 2.67
NME3-203ENST00000563367 USP38Q8NB14 1042 aa31.76■■■□□ 2.67
NME3-203ENST00000563367 TTC3P53804 2025 aa31.76■■■□□ 2.67
NME3-203ENST00000563367 TBC1D8BQ0IIM8 1120 aa31.75■■■□□ 2.67
NME3-203ENST00000563367 ZNF174Q15697 407 aa31.75■■■□□ 2.67
NME3-203ENST00000563367 TMEM40Q8WWA1 233 aa31.75■■■□□ 2.67
NME3-203ENST00000563367 DYDC2Q96IM9 177 aa31.75■■■□□ 2.67
NME3-203ENST00000563367 PRDM12Q9H4Q4 367 aa31.75■■■□□ 2.67
NME3-203ENST00000563367 SUGCTQ9HAC7 445 aa31.75■■■□□ 2.67
NME3-203ENST00000563367 PADI3Q9ULW8 664 aa31.75■■■□□ 2.67
NME3-203ENST00000563367 ARID2Q68CP9 1835 aa31.75■■■□□ 2.67
NME3-203ENST00000563367 GPR32O75388 356 aa31.74■■■□□ 2.67
NME3-203ENST00000563367 KIZQ2M2Z5 673 aa31.74■■■□□ 2.67
NME3-203ENST00000563367 PLA2G4FQ68DD2 849 aa31.74■■■□□ 2.67
NME3-203ENST00000563367 TOP1MTQ969P6 601 aa31.74■■■□□ 2.67
NME3-203ENST00000563367 RAD9AQ99638 391 aa31.74■■■□□ 2.67
NME3-203ENST00000563367 LXNQ9BS40 222 aa31.74■■■□□ 2.67
NME3-203ENST00000563367 KIF3AQ9Y496 699 aa31.74■■■□□ 2.67
NME3-203ENST00000563367 ENPP3O14638 875 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms