RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ANKRD20A12PQ8NF67 263 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 TLL2Q9Y6L7 1015 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 N4BP3O15049 544 aa19.95■□□□□ 0.78
COMMD4-208ENST00000563220 KIF20AO95235 890 aa19.95■□□□□ 0.78
COMMD4-208ENST00000563220 GCNT3O95395 438 aa19.95■□□□□ 0.78
COMMD4-208ENST00000563220 ARMCX2Q7L311 632 aa19.95■□□□□ 0.78
COMMD4-208ENST00000563220 ZNF507Q8TCN5 953 aa19.95■□□□□ 0.78
COMMD4-208ENST00000563220 CNOT6LQ96LI5 555 aaKnown RBP19.95■□□□□ 0.78
COMMD4-208ENST00000563220 TSG101Q99816 390 aa19.95■□□□□ 0.78
COMMD4-208ENST00000563220 MAGEC2Q9UBF1 373 aaPredicted RBP19.95■□□□□ 0.78
COMMD4-208ENST00000563220 IVNS1ABPQ9Y6Y0 642 aa19.95■□□□□ 0.78
COMMD4-208ENST00000563220 ADGRA2Q96PE1 1338 aa19.95■□□□□ 0.78
COMMD4-208ENST00000563220 IGKV6D-21A0A0A0MT36 114 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 FAM155AB1AL88 458 aaPredicted RBP19.94■□□□□ 0.78
COMMD4-208ENST00000563220 DKC1O60832 514 aaKnown RBP eCLIP19.94■□□□□ 0.78
COMMD4-208ENST00000563220 ATP4AP20648 1035 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 KCNA1Q09470 495 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 KNOP1Q1ED39 458 aaKnown RBP19.94■□□□□ 0.78
COMMD4-208ENST00000563220 BMT2Q1RMZ1 405 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 TMEM63BQ5T3F8 832 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 ARMCX5Q6P1M9 558 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 CCDC62Q6P9F0 684 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 ZNF720Q7Z2F6 126 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 PDGFCQ9NRA1 345 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 SEL1LQ9UBV2 794 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 MAFBQ9Y5Q3 323 aaPredicted RBP19.94■□□□□ 0.78
COMMD4-208ENST00000563220 DOCK5Q9H7D0 1870 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 IGSF9BQ9UPX0 1349 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 GSDMDP57764 484 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 PRKCEQ02156 737 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 TBX2Q13207 712 aaPredicted RBP19.94■□□□□ 0.78
COMMD4-208ENST00000563220 GRB14Q14449 540 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 ODR4Q5SWX8 454 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 SPECC1LQ69YQ0 1117 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 KCNV1Q6PIU1 500 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 METTL7BQ6UX53 244 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 OTUD6AQ7L8S5 288 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 FAM114A1Q8IWE2 563 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 CCDC43Q96MW1 224 aaKnown RBP19.94■□□□□ 0.78
COMMD4-208ENST00000563220 PCYT2Q99447 389 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 ZNF302Q9NR11 478 aa19.94■□□□□ 0.78
COMMD4-208ENST00000563220 FKBP3Q00688 224 aaKnown RBP19.93■□□□□ 0.78
COMMD4-208ENST00000563220 TAF1CQ15572 869 aaPredicted RBP19.93■□□□□ 0.78
COMMD4-208ENST00000563220 ZC2HC1CQ53FD0 456 aaPredicted RBP19.93■□□□□ 0.78
COMMD4-208ENST00000563220 CELF3Q5SZQ8 465 aaKnown RBP19.93■□□□□ 0.78
COMMD4-208ENST00000563220 PLEKHH3Q7Z736 793 aa19.93■□□□□ 0.78
COMMD4-208ENST00000563220 IFNL1Q8IU54 200 aa19.93■□□□□ 0.78
COMMD4-208ENST00000563220 FAM178BQ8IXR5 827 aa19.93■□□□□ 0.78
COMMD4-208ENST00000563220 CEP170P1Q96L14 293 aa19.93■□□□□ 0.78
COMMD4-208ENST00000563220 TUBGCP2Q9BSJ2 902 aa19.93■□□□□ 0.78
COMMD4-208ENST00000563220 MLXIPQ9HAP2 919 aa19.93■□□□□ 0.78
COMMD4-208ENST00000563220 ZCCHC17Q9NP64 241 aaKnown RBP19.93■□□□□ 0.78
COMMD4-208ENST00000563220 PYCARDQ9ULZ3 195 aa19.93■□□□□ 0.78
COMMD4-208ENST00000563220 LRRC37A2A6NM11 1700 aa19.93■□□□□ 0.78
COMMD4-208ENST00000563220 ZNFX1Q9P2E3 1918 aaKnown RBP19.93■□□□□ 0.78
COMMD4-208ENST00000563220 FGFR1OPO95684 399 aaKnown RBP19.92■□□□□ 0.78
COMMD4-208ENST00000563220 MAPK4P31152 587 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 SEPT1Q8WYJ6 367 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 COPS5Q92905 334 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 GPRC5CQ9NQ84 441 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 TRAF3IP3Q9Y228 551 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 EIF3DO15371 548 aaKnown RBP eCLIP19.92■□□□□ 0.78
COMMD4-208ENST00000563220 OFD1O75665 1012 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 XKR3Q5GH77 459 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 DPP9Q86TI2 863 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 KSR1Q8IVT5 923 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 ZC3H3Q8IXZ2 948 aaKnown RBP19.92■□□□□ 0.78
COMMD4-208ENST00000563220 STRA6Q9BX79 667 aa19.92■□□□□ 0.78
COMMD4-208ENST00000563220 LGALS16A8MUM7 142 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 TXNP10599 105 aaKnown RBP19.91■□□□□ 0.78
COMMD4-208ENST00000563220 MTIF2P46199 727 aaKnown RBP19.91■□□□□ 0.78
COMMD4-208ENST00000563220 INHBEP58166 350 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 GOLGA8FQ08AF8 430 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 GOLGA8DPQ0D2H9 430 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 HSDL1Q3SXM5 330 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 TAPT1Q6NXT6 567 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 ZNF467Q7Z7K2 595 aaPredicted RBP19.91■□□□□ 0.78
COMMD4-208ENST00000563220 SMC1BQ8NDV3 1235 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 ZIC5Q96T25 663 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 TIPINQ9BVW5 301 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 IKZF4Q9H2S9 585 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 PDLIM7Q9NR12 457 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 CYP26B1Q9NR63 512 aa19.91■□□□□ 0.78
COMMD4-208ENST00000563220 SEPT9Q9UHD8 586 aaPredicted RBP19.91■□□□□ 0.78
COMMD4-208ENST00000563220 ABT1Q9ULW3 272 aaKnown RBP19.91■□□□□ 0.78
COMMD4-208ENST00000563220 PDXKO00764 312 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 ECM2O94769 699 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 PLS3P13797 630 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 PRKCSHP14314 528 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 TCF7P36402 384 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 UBXN1Q04323 297 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 EDRF1Q3B7T1 1238 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 MIIPQ5JXC2 388 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 FAM102BQ5T8I3 360 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 CEP135Q66GS9 1140 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 C17orf99Q6UX52 265 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 PPP4R3CPQ6ZMV5 832 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 CEP63Q96MT8 703 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 GPR20Q99678 358 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 LARSQ9P2J5 1176 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms