RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 PLEKHG4Q58EX7 1191 aa17.3■□□□□ 0.36
CCNDBP1-203ENST00000562553 NCAPH2Q6IBW4 605 aa17.3■□□□□ 0.36
CCNDBP1-203ENST00000562553 RSPH3Q86UC2 560 aa17.3■□□□□ 0.36
CCNDBP1-203ENST00000562553 NOSTRINQ8IVI9 506 aa17.3■□□□□ 0.36
CCNDBP1-203ENST00000562553 SLFN12Q8IYM2 578 aa17.3■□□□□ 0.36
CCNDBP1-203ENST00000562553 SMC3Q9UQE7 1217 aa17.3■□□□□ 0.36
CCNDBP1-203ENST00000562553 ARID2Q68CP9 1835 aa17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 BAG4O95429 457 aaKnown RBP17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 U2AF2P26368 475 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 DEFB103AP81534 67 aa17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 CUL4AQ13619 759 aa17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 NBR1Q14596 966 aa17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 LPIN1Q14693 890 aa17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 ZNF174Q15697 407 aa17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 TMCO2Q7Z6W1 182 aaPredicted RBP17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 MYLIPQ8WY64 445 aa17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 MTMR9Q96QG7 549 aa17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 WRAP73Q9P2S5 460 aaPredicted RBP17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 SEPT9Q9UHD8 586 aaPredicted RBP17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 YBX2Q9Y2T7 364 aaKnown RBP17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 KIF3AQ9Y496 699 aa17.29■□□□□ 0.36
CCNDBP1-203ENST00000562553 ABHD14A-ACY1A0A1B0GW23 586 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 MYOGP15173 224 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 KCNJ6P48051 423 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 PSMC5P62195 406 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 MKRN4PQ13434 485 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 EPHA7Q15375 998 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 TARBP2Q15633 366 aaKnown RBP17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 FBXO47Q5MNV8 452 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 KIAA0319LQ8IZA0 1049 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 MAFAQ8NHW3 353 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 TIFAQ96CG3 184 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 SLC9A7Q96T83 725 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 SH2D3AQ9BRG2 576 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 NRBP2Q9NSY0 501 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 RGL1Q9NZL6 768 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 CEP131Q9UPN4 1083 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
CCNDBP1-203ENST00000562553 CHD9Q3L8U1 2897 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 TXKP42681 527 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 QARSP47897 775 aaKnown RBP17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 TOB1P50616 345 aaPredicted RBP17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 CLCN3P51790 818 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 IKBKEQ14164 716 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 MTERF2Q49AM1 385 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 XKR3Q5GH77 459 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 PLA2G4FQ68DD2 849 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 METTL13Q8N6R0 699 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 LINC01465Q8N7H1 131 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 SEPT8Q92599 483 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 DYDC2Q96IM9 177 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 CEP89Q96ST8 783 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 PPP1R16BQ96T49 567 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 IFIH1Q9BYX4 1025 aaKnown RBP17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 NKX2-4Q9H2Z4 354 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 TTC12Q9H892 705 aaPredicted RBP17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 PCDHA12Q9UN75 941 aa17.27■□□□□ 0.36
CCNDBP1-203ENST00000562553 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 VTNP04004 478 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 RPLP2P05387 115 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 P4HBP07237 508 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 FOSL2P15408 326 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 CYP4A11Q02928 519 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 GRIN2CQ14957 1233 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 RAB30Q15771 203 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 IER5Q5VY09 327 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 MCTP1Q6DN14 999 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 ANO5Q75V66 913 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 HERC6Q8IVU3 1022 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 PHOSPHO2Q8TCD6 241 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 LXNQ9BS40 222 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 NIFKQ9BYG3 293 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 CELF4Q9BZC1 486 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 ZNF576Q9H609 170 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 AGO3Q9H9G7 860 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 CDHR5Q9HBB8 845 aa17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 NOL7Q9UMY1 257 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-203ENST00000562553 KDM3AQ9Y4C1 1321 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 POTEMA6NI47 508 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 H3BQV1 296 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 M0QZ92 97 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 MAGEB2O15479 319 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 CD52P31358 61 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 TRAPPC10P48553 1259 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 CTTNQ14247 550 aaKnown RBP17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 EFCAB12Q6NXP0 572 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 TSHZ1Q6ZSZ6 1077 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 NME8Q8N427 588 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 MSRAQ9UJ68 235 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 GINS2Q9Y248 185 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 PCDHB6Q9Y5E3 794 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 PCDHA11Q9Y5I1 949 aa17.25■□□□□ 0.35
CCNDBP1-203ENST00000562553 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 EFCAB14O75071 495 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms