RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 CTTNQ14247 550 aaKnown RBP18.73■□□□□ 0.59
CLK3-207ENST00000562389 BECN1Q14457 450 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 GPNMBQ14956 572 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 SHHQ15465 462 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 C9orf50Q5SZB4 431 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 ANO5Q75V66 913 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 DEFB128Q7Z7B8 93 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 NME8Q8N427 588 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 IGSF22Q8N9C0 903 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 SPRYD3Q8NCJ5 442 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 ERMNQ8TAM6 284 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 CEP89Q96ST8 783 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 RAB34Q9BZG1 259 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 PPME1Q9Y570 386 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 DDX11L8A8MPP1 907 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 NBNO60934 754 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 CTSHP09668 335 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 YWHABP31946 246 aaKnown RBP18.72■□□□□ 0.59
CLK3-207ENST00000562389 PDIA5Q14554 519 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 MBTPS1Q14703 1052 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 MTERF2Q49AM1 385 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 HABP4Q5JVS0 413 aaKnown RBP18.72■□□□□ 0.59
CLK3-207ENST00000562389 ARL6IP4Q66PJ3 421 aaKnown RBP18.72■□□□□ 0.59
CLK3-207ENST00000562389 DTHD1Q6ZMT9 781 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 ZNF365Q70YC5 407 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 TPH2Q8IWU9 490 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 LINC01465Q8N7H1 131 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 POLR3CQ9BUI4 534 aaPredicted RBP18.72■□□□□ 0.59
CLK3-207ENST00000562389 FAM49AQ9H0Q0 323 aaPredicted RBP18.72■□□□□ 0.59
CLK3-207ENST00000562389 TUFT1Q9NNX1 390 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 STK24Q9Y6E0 443 aa18.72■□□□□ 0.59
CLK3-207ENST00000562389 LOXHD1Q8IVV2 1947 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 TMEM150BA6NC51 233 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 SLC34A2O95436 690 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 FGBP02675 491 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 CHRNA1P02708 482 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 SPATA31C1P0DKV0 1188 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 MRPS6P82932 125 aaKnown RBP18.71■□□□□ 0.59
CLK3-207ENST00000562389 TBC1D8BQ0IIM8 1120 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 IL17AQ16552 155 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 HAUS3Q68CZ6 603 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 PLA2G4FQ68DD2 849 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 OTUD6AQ7L8S5 288 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 KIAA0319LQ8IZA0 1049 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 HERVK_113Q902F9 699 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 RNPC3Q96LT9 517 aaKnown RBP18.71■□□□□ 0.59
CLK3-207ENST00000562389 CYP26B1Q9NR63 512 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 LRWD1Q9UFC0 647 aa18.71■□□□□ 0.59
CLK3-207ENST00000562389 IGKV6-21A0A0C4DH24 114 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 MED24O75448 989 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 MUTP22033 750 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 RPA1P27694 616 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 SF3A1Q15459 793 aaKnown RBP18.7■□□□□ 0.58
CLK3-207ENST00000562389 LRIT3Q3SXY7 679 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 RASIP1Q5U651 963 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 IER5Q5VY09 327 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 CATSPER3Q86XQ3 398 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 METTL13Q8N6R0 699 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 TRPV2Q9Y5S1 764 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 CDY2AQ9Y6F7 541 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 KDM3AQ9Y4C1 1321 aa18.7■□□□□ 0.58
CLK3-207ENST00000562389 M0QZ92 97 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 MAFO75444 373 aaPredicted RBP18.69■□□□□ 0.58
CLK3-207ENST00000562389 ZSCAN22P10073 491 aaPredicted RBP18.69■□□□□ 0.58
CLK3-207ENST00000562389 ACTN1P12814 892 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 TMOD1P28289 359 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 NPEPPSP55786 919 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 EFCAB12Q6NXP0 572 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 FAM173BQ6P4H8 233 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 CNKSR3Q6P9H4 555 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 EXOC8Q8IYI6 725 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 CEP170P1Q96L14 293 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 JPH2Q9BR39 696 aaPredicted RBP18.69■□□□□ 0.58
CLK3-207ENST00000562389 SH2D3AQ9BRG2 576 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 FTOQ9C0B1 505 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLK3-207ENST00000562389 MTIF3Q9H2K0 278 aaKnown RBP18.69■□□□□ 0.58
CLK3-207ENST00000562389 ANKEF1Q9NU02 776 aa18.69■□□□□ 0.58
CLK3-207ENST00000562389 MICAL3Q7RTP6 2002 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 BAIAP3O94812 1187 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 XRCC6P12956 609 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLK3-207ENST00000562389 CLCN3P51790 818 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 PLEKHG4Q58EX7 1191 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 OTOP2Q7RTS6 562 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 LRRC71Q8N4P6 559 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 MAP7D2Q96T17 732 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 CELF4Q9BZC1 486 aaKnown RBP18.68■□□□□ 0.58
CLK3-207ENST00000562389 DHX33Q9H6R0 707 aaKnown RBP18.68■□□□□ 0.58
CLK3-207ENST00000562389 CLIC4Q9Y696 253 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 SQORQ9Y6N5 450 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 TRIOBPQ9H2D6 2365 aa18.68■□□□□ 0.58
CLK3-207ENST00000562389 VWA3AA6NCI4 1184 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 ZBTB39O15060 712 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 F13A1P00488 732 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 CCT6AP40227 531 aaKnown RBP18.67■□□□□ 0.58
CLK3-207ENST00000562389 RFC5P40937 340 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 TMEM62Q0P6H9 643 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 PTPAQ15257 358 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 XKR9Q5GH70 373 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 FBXO47Q5MNV8 452 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 ZNF710Q8N1W2 664 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms