RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 ZNF214Q9UL59 606 aaPredicted RBP12.83□□□□□ -0.35
PCAT1-202ENST00000561978 DNM3Q9UQ16 869 aa12.83□□□□□ -0.35
PCAT1-202ENST00000561978 TRIM17Q9Y577 477 aa12.83□□□□□ -0.35
PCAT1-202ENST00000561978 EPN1Q9Y6I3 576 aaPredicted RBP12.83□□□□□ -0.35
PCAT1-202ENST00000561978 GNA14O95837 355 aa12.83□□□□□ -0.36
PCAT1-202ENST00000561978 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCAT1-202ENST00000561978 TAL1P17542 331 aaPredicted RBP12.83□□□□□ -0.36
PCAT1-202ENST00000561978 RPA1P27694 616 aa12.83□□□□□ -0.36
PCAT1-202ENST00000561978 COASYQ13057 564 aa12.83□□□□□ -0.36
PCAT1-202ENST00000561978 MAN2A1Q16706 1144 aa12.83□□□□□ -0.36
PCAT1-202ENST00000561978 VWA3BQ502W6 1294 aa12.83□□□□□ -0.36
PCAT1-202ENST00000561978 FAM26FQ5R3K3 315 aa12.83□□□□□ -0.36
PCAT1-202ENST00000561978 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
PCAT1-202ENST00000561978 REPS2Q8NFH8 660 aa12.83□□□□□ -0.36
PCAT1-202ENST00000561978 PCMTD1Q96MG8 357 aaPredicted RBP12.83□□□□□ -0.36
PCAT1-202ENST00000561978 MOV10L1Q9BXT6 1211 aaKnown RBP12.83□□□□□ -0.36
PCAT1-202ENST00000561978 MRPL44Q9H9J2 332 aaKnown RBP12.83□□□□□ -0.36
PCAT1-202ENST00000561978 SLC38A10Q9HBR0 1119 aa12.83□□□□□ -0.36
PCAT1-202ENST00000561978 MRPL11Q9Y3B7 192 aaKnown RBP12.83□□□□□ -0.36
PCAT1-202ENST00000561978 EFCAB8A8MWE9 144 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 GCOM1H8Y6P7 765 aaPredicted RBP12.82□□□□□ -0.36
PCAT1-202ENST00000561978 TNPO2O14787 897 aaKnown RBP12.82□□□□□ -0.36
PCAT1-202ENST00000561978 POLR2MP0CAP2 368 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 KRT83P78385 493 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 FKBP3Q00688 224 aaKnown RBP12.82□□□□□ -0.36
PCAT1-202ENST00000561978 MIIPQ5JXC2 388 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 SNRNP48Q6IEG0 339 aaKnown RBP12.82□□□□□ -0.36
PCAT1-202ENST00000561978 OTOP1Q7RTM1 612 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 GPBP1Q86WP2 473 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 UBXN4Q92575 508 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 HPS3Q969F9 1004 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 WDR24Q96S15 920 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 RANBP17Q9H2T7 1088 aaKnown RBP12.82□□□□□ -0.36
PCAT1-202ENST00000561978 OCEL1Q9H607 264 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 LZTFL1Q9NQ48 299 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 RIPK3Q9Y572 518 aa12.82□□□□□ -0.36
PCAT1-202ENST00000561978 CTDP1Q9Y5B0 961 aaPredicted RBP12.82□□□□□ -0.36
PCAT1-202ENST00000561978 E9PMD0 336 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 RNF225M0QZC1 329 aaPredicted RBP12.81□□□□□ -0.36
PCAT1-202ENST00000561978 ZBED4O75132 1171 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 NDUFA10O95299 355 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 KRT18P05783 430 aaKnown RBP12.81□□□□□ -0.36
PCAT1-202ENST00000561978 ERCC3P19447 782 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 CYLC1P35663 651 aaPredicted RBP12.81□□□□□ -0.36
PCAT1-202ENST00000561978 STAT3P40763 770 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 FCGRTP55899 365 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 TUBB4BP68371 445 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 CDK17Q00537 523 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 MEA1Q16626 185 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 NCAPG2Q86XI2 1143 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 CCDC170Q8IYT3 715 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 GJA10Q969M2 543 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 AGBL1Q96MI9 1066 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 CEP63Q96MT8 703 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 POLR3CQ9BUI4 534 aaPredicted RBP12.81□□□□□ -0.36
PCAT1-202ENST00000561978 NDST4Q9H3R1 872 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 HOMER2Q9NSB8 354 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 ZNF536O15090 1300 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 POTEB3A0JP26 581 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 IPO7O95373 1038 aaKnown RBP12.81□□□□□ -0.36
PCAT1-202ENST00000561978 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 CYP11B2P19099 503 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 SLC12A3P55017 1021 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 CCNA1P78396 465 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 HERC4Q5GLZ8 1057 aaPredicted RBP12.81□□□□□ -0.36
PCAT1-202ENST00000561978 NCAPH2Q6IBW4 605 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 POTEBQ6S5H4 581 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 ZNF662Q6ZS27 426 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 GPR142Q7Z601 462 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 CATSPER3Q86XQ3 398 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 SYT2Q8N9I0 419 aaPredicted RBP12.81□□□□□ -0.36
PCAT1-202ENST00000561978 LENG9Q96B70 501 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 TEX13BQ9BXU2 312 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 TTYH3Q9C0H2 523 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 TMEM51Q9NW97 253 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 MRFAP1Q9Y605 127 aa12.81□□□□□ -0.36
PCAT1-202ENST00000561978 FRMD3A2A2Y4 597 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 CTAGE9A4FU28 777 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 OPLAHO14841 1288 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 MSH4O15457 936 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 MAFGO15525 162 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 MED24O75448 989 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 PRKCZQ05513 592 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 NAA30Q147X3 362 aaPredicted RBP12.8□□□□□ -0.36
PCAT1-202ENST00000561978 ELF2Q15723 593 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 CTU1Q7Z7A3 348 aaKnown RBP12.8□□□□□ -0.36
PCAT1-202ENST00000561978 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
PCAT1-202ENST00000561978 EDEM3Q9BZQ6 932 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 HAUS4Q9H6D7 363 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 GABRQQ9UN88 632 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 ZNFX1Q9P2E3 1918 aaKnown RBP12.8□□□□□ -0.36
PCAT1-202ENST00000561978 KIAA0100Q14667 2235 aaKnown RBP12.8□□□□□ -0.36
PCAT1-202ENST00000561978 CFBP00751 764 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 MUTP22033 750 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 MAPK4P31152 587 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 HOXA13P31271 388 aaPredicted RBP12.8□□□□□ -0.36
PCAT1-202ENST00000561978 ZNF569Q5MCW4 686 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms