RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 GOLGA8BA8MQT2 603 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 MBTPS2O43462 519 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 TBX10O75333 385 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 ITGB1P05556 798 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 KLRC1P26715 233 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 SARSP49591 514 aaKnown RBP16.55■□□□□ 0.24
SPG7-205ENST00000561945 TMEM40Q8WWA1 233 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 MSLNLQ96KJ4 702 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 AGXT2Q9BYV1 514 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 ALG13Q9NP73 1137 aaKnown RBP16.55■□□□□ 0.24
SPG7-205ENST00000561945 RGS18Q9NS28 235 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 TBC1D22BQ9NU19 505 aa16.55■□□□□ 0.24
SPG7-205ENST00000561945 CCDC196A0A1B0GTZ2 297 aa16.54■□□□□ 0.24
SPG7-205ENST00000561945 IPO5O00410 1097 aaKnown RBP16.54■□□□□ 0.24
SPG7-205ENST00000561945 EYA4O95677 639 aa16.54■□□□□ 0.24
SPG7-205ENST00000561945 SSTR3P32745 418 aaPredicted RBP16.54■□□□□ 0.24
SPG7-205ENST00000561945 CIITAP33076 1130 aa16.54■□□□□ 0.24
SPG7-205ENST00000561945 ADD1P35611 737 aaKnown RBP16.54■□□□□ 0.24
SPG7-205ENST00000561945 SETQ01105 290 aaPredicted RBP16.54■□□□□ 0.24
SPG7-205ENST00000561945 SMAD4Q13485 552 aaKnown RBP16.54■□□□□ 0.24
SPG7-205ENST00000561945 PKN1Q16512 942 aa16.54■□□□□ 0.24
SPG7-205ENST00000561945 ZNF746Q6NUN9 644 aaPredicted RBP16.54■□□□□ 0.24
SPG7-205ENST00000561945 MIS18BP1Q6P0N0 1132 aa16.54■□□□□ 0.24
SPG7-205ENST00000561945 PLA2G4DQ86XP0 818 aa16.54■□□□□ 0.24
SPG7-205ENST00000561945 SMAP1Q8IYB5 467 aaPredicted RBP16.54■□□□□ 0.24
SPG7-205ENST00000561945 BBXQ8WY36 941 aaPredicted RBP16.54■□□□□ 0.24
SPG7-205ENST00000561945 ZNF302Q9NR11 478 aa16.54■□□□□ 0.24
SPG7-205ENST00000561945 C1orf112Q9NSG2 853 aa16.54■□□□□ 0.24
SPG7-205ENST00000561945 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
SPG7-205ENST00000561945 PIEZO1Q92508 2521 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 C9IYK1 514 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 ADAMTS3O15072 1205 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 PRPF3O43395 683 aaKnown RBP16.53■□□□□ 0.24
SPG7-205ENST00000561945 DCXO43602 365 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 MGEA5O60502 916 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 CDC45O75419 566 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 C22orf31O95567 290 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 GTF2F1P35269 517 aaKnown RBP eCLIP16.53■□□□□ 0.247e-11■■□□□ 12.8
SPG7-205ENST00000561945 ZNF76P36508 570 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 FAM189BP81408 668 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 UBE3AQ05086 875 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 ODR4Q5SWX8 454 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 LINC01465Q8N7H1 131 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 EFHBQ8N7U6 833 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 KLHL23Q8NBE8 558 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
SPG7-205ENST00000561945 NOC2LQ9Y3T9 749 aaKnown RBP16.53■□□□□ 0.24
SPG7-205ENST00000561945 LINC01565O15544 149 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 GPR32O75388 356 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 RPS6KA5O75582 802 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 IRS1P35568 1242 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 METAP2P50579 478 aaKnown RBP eCLIP16.52■□□□□ 0.24
SPG7-205ENST00000561945 CRYBB1P53674 252 aaPredicted RBP16.52■□□□□ 0.24
SPG7-205ENST00000561945 EVCP57679 992 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 COASYQ13057 564 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 NTRK3Q16288 839 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 JAKMIP3Q5VZ66 844 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 SWSAP1Q6NVH7 229 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 SLC24A5Q71RS6 500 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 SKAP1Q86WV1 359 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.24
SPG7-205ENST00000561945 LENG9Q96B70 501 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 POP1Q99575 1024 aaKnown RBP16.52■□□□□ 0.24
SPG7-205ENST00000561945 ELAC1Q9H777 363 aaKnown RBP16.52■□□□□ 0.24
SPG7-205ENST00000561945 C6orf50Q9HD87 102 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 CLEC1BQ9P126 229 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 ST3GAL5Q9UNP4 418 aa16.52■□□□□ 0.24
SPG7-205ENST00000561945 DDX39AO00148 427 aaKnown RBP16.51■□□□□ 0.23
SPG7-205ENST00000561945 BACH1O14867 736 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 GPR182O15218 404 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 EDIL3O43854 480 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 HSPA4P34932 840 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 DSC3Q14574 896 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 TMEM266Q2M3C6 531 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 HERC4Q5GLZ8 1057 aaPredicted RBP16.51■□□□□ 0.23
SPG7-205ENST00000561945 ADGRD2Q7Z7M1 963 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 REXO1Q8N1G1 1221 aaKnown RBP16.51■□□□□ 0.23
SPG7-205ENST00000561945 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 SMRP1Q8NCR6 262 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 POF1BQ8WVV4 589 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 PPP2R3CQ969Q6 453 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 ZNF577Q9BSK1 485 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 UPF3BQ9BZI7 483 aaKnown RBP16.51■□□□□ 0.23
SPG7-205ENST00000561945 CD207Q9UJ71 328 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 PCDHB7Q9Y5E2 793 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 PCDHA10Q9Y5I2 948 aa16.51■□□□□ 0.23
SPG7-205ENST00000561945 GNA11P29992 359 aa16.5■□□□□ 0.23
SPG7-205ENST00000561945 GATMP50440 423 aa16.5■□□□□ 0.23
SPG7-205ENST00000561945 APOBRQ0VD83 1088 aa16.5■□□□□ 0.23
SPG7-205ENST00000561945 NFX1Q12986 1120 aaKnown RBP16.5■□□□□ 0.23
SPG7-205ENST00000561945 PAN2Q504Q3 1202 aaKnown RBP16.5■□□□□ 0.23
SPG7-205ENST00000561945 Q6ZUG5 572 aa16.5■□□□□ 0.23
SPG7-205ENST00000561945 FAM228AQ86W67 206 aa16.5■□□□□ 0.23
SPG7-205ENST00000561945 ADAM2Q99965 735 aa16.5■□□□□ 0.23
SPG7-205ENST00000561945 RNF26Q9BY78 433 aaPredicted RBP16.5■□□□□ 0.23
SPG7-205ENST00000561945 KCNH6Q9H252 994 aa16.5■□□□□ 0.23
SPG7-205ENST00000561945 TMEM161AQ9NX61 479 aa16.5■□□□□ 0.23
SPG7-205ENST00000561945 LRFN2Q9ULH4 789 aa16.5■□□□□ 0.23
SPG7-205ENST00000561945 CEP131Q9UPN4 1083 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms