RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 KLHL10Q6JEL2 608 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 XRRA1Q6P2D8 792 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 FOXR2Q6PJQ5 311 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 RNF207Q6ZRF8 634 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 CCDC186Q7Z3E2 898 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 VSIG10LQ86VR7 867 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 VSTM4Q8IW00 320 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 C2orf69Q8N8R5 385 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 SYT2Q8N9I0 419 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 RASSF8Q8NHQ8 419 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 CACTINQ8WUQ7 758 aaKnown RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 NELFBQ8WX92 580 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 HPS3Q969F9 1004 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 DHTKD1Q96HY7 919 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 MRGPRX2Q96LB1 330 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 GTPBP4Q9BZE4 634 aaKnown RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 WDR11Q9BZH6 1224 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 TUFT1Q9NNX1 390 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 A1CFQ9NQ94 594 aaKnown RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 KCNH7Q9NS40 1196 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 HOMER2Q9NSB8 354 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 CYP39A1Q9NYL5 469 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 RGL1Q9NZL6 768 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 WRAP73Q9P2S5 460 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 ADD3Q9UEY8 706 aaKnown RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 LIMA1Q9UHB6 759 aaKnown RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 NPHP3-ACAD11A0A0J9YXS1 232 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 TRIM49BA6NDI0 452 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 IPO5O00410 1097 aaKnown RBP7.27□□□□□ -1.25
CAPN3-210ENST00000561817 MAFGO15525 162 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 PEX10O60683 326 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 EYA4O95677 639 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 PTMAP06454 111 aaKnown RBP7.27□□□□□ -1.25
CAPN3-210ENST00000561817 TPM3P06753 285 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 SMPD1P17405 629 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 JUNDP17535 347 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 EIF2AK2P19525 551 aaKnown RBP7.27□□□□□ -1.25
CAPN3-210ENST00000561817 CCNE1P24864 410 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 WNT7BP56706 349 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 UBASH3AP57075 661 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 LRMPQ12912 555 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 COASYQ13057 564 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 PSMD2Q13200 908 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 DHX8Q14562 1220 aaKnown RBP7.27□□□□□ -1.25
CAPN3-210ENST00000561817 ZCWPW2Q504Y3 356 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 HAUS3Q68CZ6 603 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 CENPPQ6IPU0 288 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 DYMQ7RTS9 669 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 ARMC9Q7Z3E5 817 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 RETREG3Q86VR2 466 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 RIOX2Q8IUF8 465 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 GUF1Q8N442 669 aaKnown RBP7.27□□□□□ -1.25
CAPN3-210ENST00000561817 MB21D1Q8N884 522 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 GLIS3Q8NEA6 775 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 CHST13Q8NET6 341 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 ERMNQ8TAM6 284 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 DYDC2Q96IM9 177 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 CDK5RAP3Q96JB5 506 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 INPP4AQ96PE3 977 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-210ENST00000561817 RMDN3Q96TC7 470 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 ZNF577Q9BSK1 485 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 FGFBP2Q9BYJ0 223 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 LRRC27Q9C0I9 530 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 SEMA6BQ9H3T3 888 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 R3HDMLQ9H3Y0 253 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 ACAD9Q9H845 621 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 EXOC1Q9NV70 894 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 GMPR2Q9P2T1 348 aaKnown RBP7.27□□□□□ -1.25
CAPN3-210ENST00000561817 IMPACTQ9P2X3 320 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 PYCARDQ9ULZ3 195 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 AGTPBP1Q9UPW5 1226 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 MAPK8IP1Q9UQF2 711 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 LRRC37A2A6NM11 1700 aa7.27□□□□□ -1.25
CAPN3-210ENST00000561817 CARNS1A5YM72 827 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 GOLGA6L6A8MZA4 724 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 ZBTB39O15060 712 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 TEX33O43247 280 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 TPD52L2O43399 206 aaKnown RBP7.26□□□□□ -1.25
CAPN3-210ENST00000561817 CBFA2T2O43439 604 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 GAS7O60861 476 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 ATP9AO75110 1047 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 LYPLA2O95372 231 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 CCNE2O96020 404 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 NR3C2P08235 984 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 ZNF16P17020 682 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-210ENST00000561817 ERCC3P19447 782 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 EDNRBP24530 442 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 HOXD13P35453 343 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 PPP1R2P41236 205 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 HERVK_113P62684 666 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 CCZ1BP86790 482 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 CCZ1P86791 482 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-210ENST00000561817 GIT2Q14161 759 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 CTTNQ14247 550 aaKnown RBP7.26□□□□□ -1.25
CAPN3-210ENST00000561817 KRT31Q15323 416 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 HSP90AA4PQ58FG1 418 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 ANKRD40Q6AI12 368 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 CYP4F22Q6NT55 531 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 ARMCX5Q6P1M9 558 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 NSMFQ6X4W1 530 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms