RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ACRP10323 421 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 HOXA5P20719 270 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 GUCY2CP25092 1073 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 FLT3LGP49771 235 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 GRAPQ13588 217 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 AAK1Q2M2I8 961 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 SUPT20HL1Q3ZLR7 823 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 AKNAD1Q5T1N1 836 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 NBPF12Q5TAG4 269 aaPredicted RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 LARP1BQ659C4 914 aaKnown RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 UNC5AQ6ZN44 842 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 TTC6Q86TZ1 520 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 APOBEC3FQ8IUX4 373 aaKnown RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 SPACA3Q8IXA5 215 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 CKAP2LQ8IYA6 745 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 RBBP8NLQ8NC74 664 aaPredicted RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 TBC1D16Q8TBP0 767 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 GRAPLQ8TC17 118 aaPredicted RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 HNRNPLLQ8WVV9 542 aaKnown RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 RELTQ969Z4 430 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 ZNF512BQ96KM6 892 aaPredicted RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 SLC6A18Q96N87 628 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 PUS7Q96PZ0 661 aaKnown RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 TRIM55Q9BYV6 548 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 CARS2Q9HA77 564 aaKnown RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 DCP1AQ9NPI6 582 aaPredicted RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 ST7Q9NRC1 585 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 RALYQ9UKM9 306 aaKnown RBP4.16□□□□□ -1.74
SPG11-225ENST00000561391 PCDHB10Q9UN67 800 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 CEP131Q9UPN4 1083 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 PFASO15067 1338 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 UBN2Q6ZU65 1347 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 NCOR1O75376 2440 aa4.15□□□□□ -1.74
SPG11-225ENST00000561391 A0A1W2PQH9 124 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 RGS13O14921 159 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 IGSF3O75054 1194 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 CLEC3AO75596 197 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 UBOX5O94941 541 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 NTSR2O95665 410 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 EOMESO95936 686 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 TP53P04637 393 aaPredicted RBP4.15□□□□□ -1.75
SPG11-225ENST00000561391 U2AF1L5P0DN76 240 aaPredicted RBP4.15□□□□□ -1.75
SPG11-225ENST00000561391 CLCN7P51798 805 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 U2AF1Q01081 240 aaKnown RBP eCLIP4.15□□□□□ -1.75
SPG11-225ENST00000561391 TEFQ10587 303 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 MTHFSDQ2M296 383 aaKnown RBP4.15□□□□□ -1.75
SPG11-225ENST00000561391 GNPTABQ3T906 1256 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 TNNI3KQ59H18 835 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 SLC10A5Q5PT55 438 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 PPP1R42Q7Z4L9 355 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 TMEM192Q8IY95 271 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 PPP1R13LQ8WUF5 828 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 BADQ92934 168 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 CARD11Q9BXL7 1154 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 CD320Q9NPF0 282 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 PRDM5Q9NQX1 630 aaPredicted RBP4.15□□□□□ -1.75
SPG11-225ENST00000561391 ACTR10Q9NZ32 417 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 PRKAG3Q9UGI9 489 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 ADGRA2Q96PE1 1338 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 PKD1L2Q7Z442 2459 aa4.15□□□□□ -1.75
SPG11-225ENST00000561391 CDH23Q9H251 3354 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 CACNA1BQ00975 2339 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 PDHXO00330 501 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 TNFRSF10CO14798 259 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 U2SURPO15042 1029 aaKnown RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 DDAH1O94760 285 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 CETPP11597 493 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 CYP7A1P22680 504 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 ETV3P41162 512 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 LINC00310P59036 64 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 TDRD10Q5VZ19 366 aaKnown RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 ZNF746Q6NUN9 644 aaPredicted RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 TTLL7Q6ZT98 887 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 DNAJB8Q8NHS0 232 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 UBXN4Q92575 508 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 CELF1Q92879 486 aaKnown RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 TIFAQ96CG3 184 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 DHRS1Q96LJ7 313 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 RNPC3Q96LT9 517 aaKnown RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 HEXIM2Q96MH2 286 aaKnown RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 KREMEN1Q96MU8 473 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 SIN3AQ96ST3 1273 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 UTP14AQ9BVJ6 771 aaKnown RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 SENP6Q9GZR1 1112 aaPredicted RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 MKRN2Q9H000 416 aaKnown RBP4.14□□□□□ -1.75
SPG11-225ENST00000561391 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.14□□□□□ -1.75
SPG11-225ENST00000561391 KCNH6Q9H252 994 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 ZCCHC4Q9H5U6 513 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 OGDHLQ9ULD0 1010 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 SSC5DA1L4H1 1573 aa4.14□□□□□ -1.75
SPG11-225ENST00000561391 CFAP54Q96N23 3096 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 SCN9AQ15858 1988 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 MED19A0JLT2 244 aaPredicted RBP4.13□□□□□ -1.75
SPG11-225ENST00000561391 CLRN2A0PK11 232 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 ERVV-1B6SEH8 477 aa4.13□□□□□ -1.75
SPG11-225ENST00000561391 ETV2O00321 342 aaPredicted RBP4.13□□□□□ -1.75
SPG11-225ENST00000561391 TNPO2O14787 897 aaKnown RBP4.13□□□□□ -1.75
SPG11-225ENST00000561391 LRRN2O75325 713 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms