RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 SHCBP1Q8NEM2 672 aa5.51□□□□□ -1.53
USP8-216ENST00000561206 COL4A3Q01955 1670 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 POLR2AP24928 1970 aaKnown RBP5.5□□□□□ -1.53
USP8-216ENST00000561206 RPS6KA4O75676 772 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 CTGFP29279 349 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 ETFBP38117 255 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 PPP2R2AP63151 447 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 STILQ15468 1287 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 Q6ZRM9 215 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 KCTD13Q8WZ19 329 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 GPR27Q9NS67 375 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 SH3BP1Q9Y3L3 701 aa5.5□□□□□ -1.53
USP8-216ENST00000561206 AGRPO00253 132 aa5.49□□□□□ -1.53
USP8-216ENST00000561206 GJB6O95452 261 aa5.49□□□□□ -1.53
USP8-216ENST00000561206 WDR72Q3MJ13 1102 aa5.49□□□□□ -1.53
USP8-216ENST00000561206 STRIP1Q5VSL9 837 aa5.49□□□□□ -1.53
USP8-216ENST00000561206 VPS37DQ86XT2 251 aa5.49□□□□□ -1.53
USP8-216ENST00000561206 SLC25A43Q8WUT9 341 aaPredicted RBP5.49□□□□□ -1.53
USP8-216ENST00000561206 MIEF2Q96C03 454 aa5.49□□□□□ -1.53
USP8-216ENST00000561206 SLC39A2Q9NP94 309 aa5.49□□□□□ -1.53
USP8-216ENST00000561206 MSCO60682 206 aa5.48□□□□□ -1.53
USP8-216ENST00000561206 FGRP09769 529 aa5.48□□□□□ -1.53
USP8-216ENST00000561206 CNGB1Q14028 1251 aaPredicted RBP5.48□□□□□ -1.53
USP8-216ENST00000561206 OLFML1Q6UWY5 402 aa5.48□□□□□ -1.53
USP8-216ENST00000561206 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
USP8-216ENST00000561206 TMEM176AQ96HP8 235 aa5.48□□□□□ -1.53
USP8-216ENST00000561206 IER2Q9BTL4 223 aa5.48□□□□□ -1.53
USP8-216ENST00000561206 ZNF408Q9H9D4 720 aa5.48□□□□□ -1.53
USP8-216ENST00000561206 HS3ST4Q9Y661 456 aa5.48□□□□□ -1.53
USP8-216ENST00000561206 A0A1W2PQU0 124 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 MAN2A2P49641 1150 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 CLK3P49761 638 aaKnown RBP5.47□□□□□ -1.53
USP8-216ENST00000561206 MRE11P49959 708 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 KCNQ1P51787 676 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 IL13RA1P78552 427 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 SPIRE1Q08AE8 756 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 RSPO2Q6UXX9 243 aaPredicted RBP5.47□□□□□ -1.53
USP8-216ENST00000561206 THAP3Q8WTV1 239 aaPredicted RBP5.47□□□□□ -1.53
USP8-216ENST00000561206 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.47□□□□□ -1.53
USP8-216ENST00000561206 MLST8Q9BVC4 326 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 PHF20Q9BVI0 1012 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 PPARGC1AQ9UBK2 798 aaKnown RBP5.47□□□□□ -1.53
USP8-216ENST00000561206 TRPS1Q9UHF7 1281 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 FZD1Q9UP38 647 aa5.47□□□□□ -1.53
USP8-216ENST00000561206 DLX3O60479 287 aa5.46□□□□□ -1.54
USP8-216ENST00000561206 GRK2P25098 689 aa5.46□□□□□ -1.54
USP8-216ENST00000561206 ERCC5P28715 1186 aaPredicted RBP5.46□□□□□ -1.54
USP8-216ENST00000561206 GRK3P35626 688 aa5.46□□□□□ -1.54
USP8-216ENST00000561206 GNL2Q13823 731 aaKnown RBP5.46□□□□□ -1.54
USP8-216ENST00000561206 USP53Q70EK8 1073 aa5.46□□□□□ -1.54
USP8-216ENST00000561206 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
USP8-216ENST00000561206 WNK4Q96J92 1243 aa5.46□□□□□ -1.54
USP8-216ENST00000561206 PRDM13Q9H4Q3 707 aa5.46□□□□□ -1.54
USP8-216ENST00000561206 DSEQ9UL01 958 aa5.46□□□□□ -1.54
USP8-216ENST00000561206 XDHP47989 1333 aa5.46□□□□□ -1.54
USP8-216ENST00000561206 NKRFO15226 690 aaKnown RBP eCLIP5.45□□□□□ -1.54
USP8-216ENST00000561206 ONECUT2O95948 504 aa5.45□□□□□ -1.54
USP8-216ENST00000561206 RIN1Q13671 783 aa5.45□□□□□ -1.54
USP8-216ENST00000561206 KIZQ2M2Z5 673 aa5.45□□□□□ -1.54
USP8-216ENST00000561206 LY6G5CQ5SRR4 150 aa5.45□□□□□ -1.54
USP8-216ENST00000561206 TMEM200BQ69YZ2 307 aa5.45□□□□□ -1.54
USP8-216ENST00000561206 BRIP1Q9BX63 1249 aa5.45□□□□□ -1.54
USP8-216ENST00000561206 PPFIA4O75335 1185 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 ITGB1P05556 798 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 COL6A2P12110 1019 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 TAP1Q03518 808 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 MAPK7Q13164 816 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 PTPAQ15257 358 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 RABL3Q5HYI8 236 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 LBX2Q6XYB7 198 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 FILIP1Q7Z7B0 1213 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 CELF2-AS1Q8N7Q2 184 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 OR14K1Q8NGZ2 314 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 RABGGTAQ92696 567 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 SGSM3Q96HU1 749 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 ZFYVE21Q9BQ24 234 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 TINF2Q9BSI4 451 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 R3HDMLQ9H3Y0 253 aa5.44□□□□□ -1.54
USP8-216ENST00000561206 ARHGEF17Q96PE2 2063 aaPredicted RBP5.44□□□□□ -1.54
USP8-216ENST00000561206 B3GALT2O43825 422 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 MEOX1P50221 254 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 HSP90AA2PQ14568 343 aaPredicted RBP5.43□□□□□ -1.54
USP8-216ENST00000561206 DDR2Q16832 855 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 HECTD2Q5U5R9 776 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 MCF2L2Q86YR7 1114 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 ZNF276Q8N554 614 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 C9orf106Q8NAJ2 232 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 DCAF4Q8WV16 495 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 HNRNPLLQ8WVV9 542 aaKnown RBP5.43□□□□□ -1.54
USP8-216ENST00000561206 AARSD1Q9BTE6 412 aaKnown RBP5.43□□□□□ -1.54
USP8-216ENST00000561206 ARHGEF4Q9NR80 690 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 GALNT8Q9NY28 637 aa5.43□□□□□ -1.54
USP8-216ENST00000561206 KIAA0355O15063 1070 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 FGFR1P11362 822 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 GNAT1P11488 350 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 SAFB2Q14151 953 aaKnown RBP eCLIP5.42□□□□□ -1.54
USP8-216ENST00000561206 NTRK3Q16288 839 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 KCNT2Q6UVM3 1135 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 LRRC55Q6ZSA7 311 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 RD3Q7Z3Z2 195 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms