RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 SETQ01105 290 aaPredicted RBP30.69■■■□□ 2.5
SNRPA1-215ENST00000561187 NEK9Q8TD19 979 aa30.69■■■□□ 2.5
SNRPA1-215ENST00000561187 LRFN2Q9ULH4 789 aa30.69■■■□□ 2.5
SNRPA1-215ENST00000561187 NOC2LQ9Y3T9 749 aaKnown RBP30.69■■■□□ 2.5
SNRPA1-215ENST00000561187 ZBTB42B2RXF5 422 aa30.68■■■□□ 2.5
SNRPA1-215ENST00000561187 MGEA5O60502 916 aa30.68■■■□□ 2.5
SNRPA1-215ENST00000561187 RB1P06400 928 aa30.68■■■□□ 2.5
SNRPA1-215ENST00000561187 GTF2F1P35269 517 aaKnown RBP eCLIP30.68■■■□□ 2.5
SNRPA1-215ENST00000561187 FAM178BQ8IXR5 827 aa30.68■■■□□ 2.5
SNRPA1-215ENST00000561187 KIAA0319LQ8IZA0 1049 aa30.68■■■□□ 2.5
SNRPA1-215ENST00000561187 IGFLR1Q9H665 355 aa30.68■■■□□ 2.5
SNRPA1-215ENST00000561187 SAMM50Q9Y512 469 aa30.68■■■□□ 2.5
SNRPA1-215ENST00000561187 SQORQ9Y6N5 450 aa30.68■■■□□ 2.5
SNRPA1-215ENST00000561187 MYH9P35579 1960 aaKnown RBP30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 RPS6KA5O75582 802 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 VTNP04004 478 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 GNA11P29992 359 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 KIZQ2M2Z5 673 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 CMTR2Q8IYT2 770 aaKnown RBP30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 GJD3Q8N144 294 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 NME8Q8N427 588 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 METTL13Q8N6R0 699 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 OSMRQ99650 979 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 LARP6Q9BRS8 491 aaKnown RBP30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 GABBR1Q9UBS5 961 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 KDM3AQ9Y4C1 1321 aa30.67■■■□□ 2.5
SNRPA1-215ENST00000561187 COL1A2P08123 1366 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 GRXCR2A6NFK2 248 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 C22orf31O95567 290 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 STAG3L1P0CL83 205 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 HYAL1Q12794 435 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 NTRK3Q16288 839 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 ZNF484Q5JVG2 852 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 LRFN3Q9BTN0 628 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 ERVK-5Q9HDB9 667 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 TBC1D22BQ9NU19 505 aa30.66■■■□□ 2.5
SNRPA1-215ENST00000561187 CHMP2AO43633 222 aa30.65■■■□□ 2.5
SNRPA1-215ENST00000561187 REC8O95072 547 aa30.65■■■□□ 2.5
SNRPA1-215ENST00000561187 PSMA5P28066 241 aa30.65■■■□□ 2.5
SNRPA1-215ENST00000561187 ZNF746Q6NUN9 644 aaPredicted RBP30.65■■■□□ 2.5
SNRPA1-215ENST00000561187 CCDC148Q8NFR7 591 aa30.65■■■□□ 2.5
SNRPA1-215ENST00000561187 GJA10Q969M2 543 aa30.65■■■□□ 2.5
SNRPA1-215ENST00000561187 RNF26Q9BY78 433 aaPredicted RBP30.65■■■□□ 2.5
SNRPA1-215ENST00000561187 LMAN2LQ9H0V9 348 aa30.65■■■□□ 2.5
SNRPA1-215ENST00000561187 DENND3A2RUS2 1198 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 MMP1P03956 469 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 ITGB1P05556 798 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 PSAPP07602 524 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 DNAJB1P25685 340 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 PDIA3P30101 505 aaKnown RBP30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 CLCN3P51790 818 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 DLX2Q07687 328 aaPredicted RBP30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 CRIPAKQ8N1N5 446 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 LENG9Q96B70 501 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 ZNF668Q96K58 619 aaPredicted RBP30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 ADAM2Q99965 735 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 AGXT2Q9BYV1 514 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 HCSTQ9UBK5 93 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 ST3GAL5Q9UNP4 418 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 PLAGL2Q9UPG8 496 aa30.64■■■□□ 2.5
SNRPA1-215ENST00000561187 C5orf42Q9H799 3197 aa30.64■■■□□ 2.49
SNRPA1-215ENST00000561187 LINC01565O15544 149 aa30.63■■■□□ 2.49
SNRPA1-215ENST00000561187 TMEM31Q5JXX7 168 aa30.63■■■□□ 2.49
SNRPA1-215ENST00000561187 KLHL23Q8NBE8 558 aa30.63■■■□□ 2.49
SNRPA1-215ENST00000561187 BICD2Q8TD16 824 aa30.63■■■□□ 2.49
SNRPA1-215ENST00000561187 BBXQ8WY36 941 aaPredicted RBP30.63■■■□□ 2.49
SNRPA1-215ENST00000561187 PCDHA10Q9Y5I2 948 aa30.63■■■□□ 2.49
SNRPA1-215ENST00000561187 MAFBQ9Y5Q3 323 aaPredicted RBP30.63■■■□□ 2.49
SNRPA1-215ENST00000561187 IFNAR1P17181 557 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 IRS1P35568 1242 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 LTBRP36941 435 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 SARSP49591 514 aaKnown RBP30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 CAMK1Q14012 370 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 SPOUT1Q5T280 376 aaKnown RBP30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 MCTP2Q6DN12 878 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 FAM228AQ86W67 206 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 SMAP1Q8IYB5 467 aaPredicted RBP30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 PLVAPQ9BX97 442 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 C11orf16Q9NQ32 467 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 PCDHB7Q9Y5E2 793 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 PCDHGC5Q9Y5F6 944 aa30.62■■■□□ 2.49
SNRPA1-215ENST00000561187 TBKBP1A7MCY6 615 aa30.61■■■□□ 2.49
SNRPA1-215ENST00000561187 NLRP5P59047 1200 aa30.61■■■□□ 2.49
SNRPA1-215ENST00000561187 TOB2Q14106 344 aaPredicted RBP30.61■■■□□ 2.49
SNRPA1-215ENST00000561187 COL19A1Q14993 1142 aa30.61■■■□□ 2.49
SNRPA1-215ENST00000561187 ADGRD2Q7Z7M1 963 aa30.61■■■□□ 2.49
SNRPA1-215ENST00000561187 LRRC71Q8N4P6 559 aa30.61■■■□□ 2.49
SNRPA1-215ENST00000561187 AKT3Q9Y243 479 aa30.61■■■□□ 2.49
SNRPA1-215ENST00000561187 MSH4O15457 936 aa30.6■■■□□ 2.49
SNRPA1-215ENST00000561187 EDIL3O43854 480 aa30.6■■■□□ 2.49
SNRPA1-215ENST00000561187 TBX10O75333 385 aa30.6■■■□□ 2.49
SNRPA1-215ENST00000561187 CIITAP33076 1130 aa30.6■■■□□ 2.49
SNRPA1-215ENST00000561187 STK3Q13188 491 aa30.6■■■□□ 2.49
SNRPA1-215ENST00000561187 UGCGQ16739 394 aa30.6■■■□□ 2.49
SNRPA1-215ENST00000561187 PUS10Q3MIT2 529 aaKnown RBP30.6■■■□□ 2.49
SNRPA1-215ENST00000561187 FAM102BQ5T8I3 360 aa30.6■■■□□ 2.49
SNRPA1-215ENST00000561187 FBXL16Q8N461 479 aa30.6■■■□□ 2.49
SNRPA1-215ENST00000561187 WDR81Q562E7 1941 aa30.59■■■□□ 2.49
SNRPA1-215ENST00000561187 WDR64B1ANS9 1081 aa30.59■■■□□ 2.49
SNRPA1-215ENST00000561187 RUFY3Q7L099 469 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms