RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SLC30A5Q8TAD4 765 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 AUTS2Q8WXX7 1259 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 RSPH1Q8WYR4 309 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ATP2A3Q93084 1043 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 HDAC10Q969S8 669 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 DDX11Q96FC9 970 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 FAM163AQ96GL9 167 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 CDHR1Q96JP9 859 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 KREMEN1Q96MU8 473 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 SLC2A13Q96QE2 648 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PPP1R16BQ96T49 567 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 RMDN3Q96TC7 470 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 MYCBPQ99417 103 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 CGRRF1Q99675 332 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 MIPEPQ99797 713 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PYM1Q9BRP8 204 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 ADI1Q9BV57 179 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CNPPD1Q9BV87 410 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 LSM14BQ9BX40 385 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 ASPNQ9BXN1 380 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ACE2Q9BYF1 805 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 LMAN2LQ9H0V9 348 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 OSBPL5Q9H0X9 879 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 RETREG1Q9H6L5 497 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PRKRIP1Q9H875 184 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 IPPKQ9H8X2 491 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ARMT1Q9H993 441 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CYP4F12Q9HCS2 524 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 SEPSECSQ9HD40 501 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 ALG13Q9NP73 1137 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 UBN1Q9NPG3 1134 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 GPRC5CQ9NQ84 441 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 SERHLQ9NQF3 203 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 DMRT3Q9NQL9 472 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ITM2CQ9NQX7 267 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 VPS45Q9NRW7 570 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CHST7Q9NS84 486 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 DIAPH3Q9NSV4 1193 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 BTG4Q9NY30 223 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 FRRS1LQ9P0K9 344 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 USP36Q9P275 1121 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 AASSQ9UDR5 926 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 MSRAQ9UJ68 235 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 L1RE1Q9UN81 338 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ARHGAP26Q9UNA1 814 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CEP131Q9UPN4 1083 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 JAG2Q9Y219 1238 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 COA3Q9Y2R0 106 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 GPR52Q9Y2T5 361 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PCDHA2Q9Y5H9 948 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 SNX5Q9Y5X3 404 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ST14Q9Y5Y6 855 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 NPHP3-ACAD11A0A0J9YXS1 232 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 GOLGA6L3A6NEY3 463 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TRIM64A6NGJ6 449 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TRIM64BA6NI03 449 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 H3BUI4 141 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 SCDO00767 359 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 AP3D1O14617 1153 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 HNRNPDLO14979 420 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 FYB1O15117 783 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 PHGDHO43175 533 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 NCK2O43639 380 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 BNIP3LO60238 219 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 PPFIA3O75145 1194 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 SIN3BO75182 1162 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TMEM127O75204 238 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 MTA2O94776 668 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 LRIG2O94898 1065 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 FSBPO95073 299 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 IL18RAPO95256 599 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ECEL1O95672 775 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 CKMP06732 381 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 POLBP06746 335 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 THP07101 528 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 MYF5P13349 255 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 PLS3P13797 630 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 IDEP14735 1019 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ALOX12P18054 663 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 XPAP23025 273 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 TPP2P29144 1249 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 SLC7A1P30825 629 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ABCD1P33897 745 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 HOXD12P35452 270 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 IL6STP40189 918 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 ADH7P40394 386 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ALDH9A1P49189 494 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 USP11P51784 963 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ZNF131P52739 623 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 PCBP4P57723 403 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 RPL11P62913 178 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 MRPS9P82933 396 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 CDK17Q00537 523 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 MAPK7Q13164 816 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 LSAMPQ13449 338 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 SPIDRQ14159 915 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 KRT32Q14532 448 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TMEM132BQ14DG7 1078 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 SUZ12Q15022 739 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 POSTNQ15063 836 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms