RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 IKBKEQ14164 716 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 CTTNQ14247 550 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 NBR1Q14596 966 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 UGCGQ16739 394 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 TMEM266Q2M3C6 531 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 TRIM71Q2Q1W2 868 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 MTERF2Q49AM1 385 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 EFCAB12Q6NXP0 572 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 Q7L0L9 218 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 OTUD6AQ7L8S5 288 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 NME8Q8N427 588 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 HERVK_113Q902F9 699 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 SNX21Q969T3 373 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 DYDC2Q96IM9 177 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 TMEM60Q9H2L4 133 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 SUGCTQ9HAC7 445 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 RGL1Q9NZL6 768 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 SEPT9Q9UHD8 586 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 GINS2Q9Y248 185 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 PCDHA2Q9Y5H9 948 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 SLC4A7Q9Y6M7 1214 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 SMIM35A0A1B0GVV1 85 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 WNT7AO00755 349 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 MAGEB2O15479 319 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 ZNF862O60290 1169 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 NBNO60934 754 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 RPLP2P05387 115 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 HOXC8P31273 242 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 KCNJ6P48051 423 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 DNM2P50570 870 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 CYP4A11Q02928 519 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 TBC1D8BQ0IIM8 1120 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 PTGDRQ13258 359 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 XKR3Q5GH77 459 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 INTS4Q96HW7 963 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 MTMR9Q96QG7 549 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 EIF2AK1Q9BQI3 630 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 SH2D3AQ9BRG2 576 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 ZBED2Q9BTP6 218 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 VAV3Q9UKW4 847 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 AKT3Q9Y243 479 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 PCDHB6Q9Y5E3 794 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 CDY2AQ9Y6F7 541 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 COL1A2P08123 1366 aa10.12□□□□□ -0.79
SNRPA1-214ENST00000560987 RANBP2P49792 3224 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 MBLAC1A4D2B0 266 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 CAND2O75155 1236 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 SLITRK3O94933 977 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 CHRNA1P02708 482 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 OR52Z1P0C646 297 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 TOB1P50616 345 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 MRPS6P82932 125 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 SMAD3P84022 425 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 RBL2Q08999 1139 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 ORC2Q13416 577 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 RILPL1Q5EBL4 403 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 XKR9Q5GH70 373 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 CNKSR3Q6P9H4 555 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 FERMT3Q86UX7 667 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 DBF4BQ8NFT6 615 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 ERMNQ8TAM6 284 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 SEPT8Q92599 483 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 CEP170P1Q96L14 293 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 CCDC43Q96MW1 224 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 SCLT1Q96NL6 688 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 MAP7D2Q96T17 732 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 PPP1R16BQ96T49 567 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 CELF4Q9BZC1 486 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 RAB34Q9BZG1 259 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 ZSWIM4Q9H7M6 989 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 LTBP2Q14767 1821 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 SCN5AQ14524 2016 aa10.11□□□□□ -0.79
SNRPA1-214ENST00000560987 A0A087WWV3 80 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 TMEM150BA6NC51 233 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 GRXCR1A8MXD5 290 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 ZBTB42B2RXF5 422 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 DLL1O00548 723 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 VTNP04004 478 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 GHRP10912 638 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 ATP2A2P16615 1042 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 SYT1P21579 422 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 NPEPPSP55786 919 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 FAM26DQ5JW98 314 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 B3GNT9Q6UX72 402 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 DTHD1Q6ZMT9 781 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 RPAINQ86UA6 219 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 KIAA0319LQ8IZA0 1049 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 LRRC71Q8N4P6 559 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 FOXD4L4Q8WXT5 416 aaPredicted RBP10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 FAM161BQ96MY7 647 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 LXNQ9BS40 222 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 NIFKQ9BYG3 293 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 CXXC1Q9P0U4 656 aaPredicted RBP10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 LRWD1Q9UFC0 647 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 MSRAQ9UJ68 235 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 TRPV2Q9Y5S1 764 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 EVPLQ92817 2033 aa10.1□□□□□ -0.79
SNRPA1-214ENST00000560987 IGSF9BQ9UPX0 1349 aa10.09□□□□□ -0.79
SNRPA1-214ENST00000560987 ABHD14A-ACY1A0A1B0GW23 586 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms