RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ACTR2P61160 394 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 FAM189BP81408 668 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 PTH1RQ03431 593 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 MB21D2Q8IYB1 491 aaPredicted RBP21.2■□□□□ 0.98
TPM1-226ENST00000560959 THNSL1Q8IYQ7 743 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 COLGALT1Q8NBJ5 622 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 ADAM2Q99965 735 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 MXRA8Q9BRK3 442 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 SDF4Q9BRK5 362 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 NGRNQ9NPE2 291 aaKnown RBP21.2■□□□□ 0.98
TPM1-226ENST00000560959 TYW1Q9NV66 732 aaKnown RBP21.2■□□□□ 0.98
TPM1-226ENST00000560959 PKD2L1Q9P0L9 805 aa21.2■□□□□ 0.98
TPM1-226ENST00000560959 ZFHX2Q9C0A1 2572 aaPredicted RBP21.19■□□□□ 0.98
TPM1-226ENST00000560959 DENND3A2RUS2 1198 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 MGEA5O60502 916 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 LAG3P18627 525 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 KLRC1P26715 233 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 RBM10P98175 930 aaKnown RBP21.19■□□□□ 0.98
TPM1-226ENST00000560959 TMEM266Q2M3C6 531 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 FAM102BQ5T8I3 360 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 SYCE2Q6PIF2 218 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 UBALD2Q8IYN6 164 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 TRAPPC12Q8WVT3 735 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 MRPS27Q92552 414 aaKnown RBP21.19■□□□□ 0.98
TPM1-226ENST00000560959 CWH43Q9H720 699 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 FAM86C1Q9NVL1 165 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 NR2E1Q9Y466 385 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 KIAA1671Q9BY89 1806 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 KMT2EQ8IZD2 1858 aa21.19■□□□□ 0.98
TPM1-226ENST00000560959 IGKV6D-21A0A0A0MT36 114 aa21.18■□□□□ 0.98
TPM1-226ENST00000560959 GALR2O43603 387 aaPredicted RBP21.18■□□□□ 0.98
TPM1-226ENST00000560959 HBP1O60381 514 aa21.18■□□□□ 0.98
TPM1-226ENST00000560959 TECP42680 631 aa21.18■□□□□ 0.98
TPM1-226ENST00000560959 KIAA0319LQ8IZA0 1049 aa21.18■□□□□ 0.98
TPM1-226ENST00000560959 TMEM161AQ9NX61 479 aa21.18■□□□□ 0.98
TPM1-226ENST00000560959 ST3GAL5Q9UNP4 418 aa21.18■□□□□ 0.98
TPM1-226ENST00000560959 NOC2LQ9Y3T9 749 aaKnown RBP21.18■□□□□ 0.98
TPM1-226ENST00000560959 TAF6LQ9Y6J9 622 aa21.18■□□□□ 0.98
TPM1-226ENST00000560959 MYO15AQ9UKN7 3530 aa21.18■□□□□ 0.98
TPM1-226ENST00000560959 PLEKHA8P1O95397 391 aa21.17■□□□□ 0.98
TPM1-226ENST00000560959 CALM1P0DP23 149 aa21.17■□□□□ 0.98
TPM1-226ENST00000560959 CALM2P0DP24 149 aa21.17■□□□□ 0.98
TPM1-226ENST00000560959 CALM3P0DP25 149 aa21.17■□□□□ 0.98
TPM1-226ENST00000560959 UBE2SQ16763 222 aa21.17■□□□□ 0.98
TPM1-226ENST00000560959 CASC1Q6TDU7 716 aa21.17■□□□□ 0.98
TPM1-226ENST00000560959 ZBTB33Q86T24 672 aa21.17■□□□□ 0.98
TPM1-226ENST00000560959 MYL10Q9BUA6 226 aa21.17■□□□□ 0.98
TPM1-226ENST00000560959 ATP6V0A4Q9HBG4 840 aa21.17■□□□□ 0.98
TPM1-226ENST00000560959 PLXNA4Q9HCM2 1894 aa21.16■□□□□ 0.98
TPM1-226ENST00000560959 COL1A2P08123 1366 aa21.16■□□□□ 0.98
TPM1-226ENST00000560959 H0Y858 1186 aa21.16■□□□□ 0.98
TPM1-226ENST00000560959 MAP4K1Q92918 833 aa21.16■□□□□ 0.98
TPM1-226ENST00000560959 NECTIN4Q96NY8 510 aa21.16■□□□□ 0.98
TPM1-226ENST00000560959 CDHR5Q9HBB8 845 aa21.16■□□□□ 0.98
TPM1-226ENST00000560959 SORCS3Q9UPU3 1222 aa21.16■□□□□ 0.98
TPM1-226ENST00000560959 HOXA2O43364 376 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 FOSP01100 380 aaPredicted RBP21.15■□□□□ 0.98
TPM1-226ENST00000560959 CHMLP26374 656 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 PPM1AP35813 382 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 LIFRP42702 1097 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 CRYBB1P53674 252 aaPredicted RBP21.15■□□□□ 0.98
TPM1-226ENST00000560959 KRT17Q04695 432 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 ITIH3Q06033 890 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 TPRNQ4KMQ1 711 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 CEP55Q53EZ4 464 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 ZNF484Q5JVG2 852 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 TMEM40Q8WWA1 233 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 CASP10Q92851 521 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 TMEM87BQ96K49 555 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 TCF25Q9BQ70 676 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 TMEM117Q9H0C3 514 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 AGO4Q9HCK5 861 aaKnown RBP21.15■□□□□ 0.98
TPM1-226ENST00000560959 GINS2Q9Y248 185 aa21.15■□□□□ 0.98
TPM1-226ENST00000560959 CCDC69A6NI79 296 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 MEIS1O00470 390 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 ARP10275 920 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 GSPT1P15170 499 aaKnown RBP21.14■□□□□ 0.97
TPM1-226ENST00000560959 PDE4AP27815 886 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 NBL1P41271 181 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 ITGB3BPQ13352 177 aaPredicted RBP21.14■□□□□ 0.97
TPM1-226ENST00000560959 MTMR3Q13615 1198 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 TTC22Q5TAA0 569 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 PLPP4Q5VZY2 271 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 ABHD15Q6UXT9 468 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 KREMEN2Q8NCW0 462 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 CYP2W1Q8TAV3 490 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 ADAM7Q9H2U9 754 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 ENTPD7Q9NQZ7 604 aa21.14■□□□□ 0.97
TPM1-226ENST00000560959 SGSM2O43147 1006 aa21.13■□□□□ 0.97
TPM1-226ENST00000560959 PDGFBP01127 241 aaPredicted RBP21.13■□□□□ 0.97
TPM1-226ENST00000560959 DSC3Q14574 896 aa21.13■□□□□ 0.97
TPM1-226ENST00000560959 FAM160B1Q5W0V3 765 aa21.13■□□□□ 0.97
TPM1-226ENST00000560959 CES5AQ6NT32 575 aa21.13■□□□□ 0.97
TPM1-226ENST00000560959 KCNT2Q6UVM3 1135 aa21.13■□□□□ 0.97
TPM1-226ENST00000560959 NFXL1Q6ZNB6 911 aa21.13■□□□□ 0.97
TPM1-226ENST00000560959 CMTR1Q8N1G2 835 aaKnown RBP21.13■□□□□ 0.97
TPM1-226ENST00000560959 ZNF710Q8N1W2 664 aa21.13■□□□□ 0.97
TPM1-226ENST00000560959 CASD1Q96PB1 797 aa21.13■□□□□ 0.97
TPM1-226ENST00000560959 PTPRZ1P23471 2315 aaPredicted RBP21.13■□□□□ 0.97
TPM1-226ENST00000560959 FNDC1Q4ZHG4 1894 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms