RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 A0A087WWV3 80 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 AXDND1Q5T1B0 1012 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-212ENST00000560801 ZNF746Q6NUN9 644 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-212ENST00000560801 NOTUMQ6P988 496 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 PSRC1Q6PGN9 363 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-212ENST00000560801 SND1Q7KZF4 910 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRPM1-212ENST00000560801 MSL3Q8N5Y2 521 aaKnown RBP10.56□□□□□ -0.72
TRPM1-212ENST00000560801 DNAJB3Q8WWF6 145 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 CTAGE1Q96RT6 745 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 PCIF1Q9H4Z3 704 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 CYP39A1Q9NYL5 469 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 SFI1A8K8P3 1242 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 OATP04181 439 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 DNAJB2P25686 324 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 RTP1P59025 263 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 GRIK4Q16099 956 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 LDLRAD1Q5T700 205 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 TATDN1Q6P1N9 297 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-212ENST00000560801 RNF139Q8WU17 664 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 LRRC4Q9HBW1 653 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 ALS2Q96Q42 1657 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 SLC16A4O15374 487 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 LRG1P02750 347 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 INSRRP14616 1297 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 MUM1L1Q5H9M0 696 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 FAM149B1Q96BN6 582 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 EIF2AK1Q9BQI3 630 aaKnown RBP10.56□□□□□ -0.72
TRPM1-212ENST00000560801 SLC38A7Q9NVC3 462 aa10.56□□□□□ -0.72
TRPM1-212ENST00000560801 ZNF233A6NK53 670 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 MYBP10242 640 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 XRCC5P13010 732 aaKnown RBP10.55□□□□□ -0.72
TRPM1-212ENST00000560801 GBP2P32456 591 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-212ENST00000560801 LMAN1P49257 510 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 NDUFV1P49821 464 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 NFRKBQ6P4R8 1299 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 SLC51AQ86UW1 340 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 RDM1Q8NG50 284 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 MYO9BQ13459 2157 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 XPAP23025 273 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-212ENST00000560801 KYAT1Q16773 422 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 HAUS6Q7Z4H7 955 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 ABRAQ8N0Z2 381 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 PGBD3Q8N328 593 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 SNX21Q969T3 373 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 KIF12Q96FN5 646 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 HAUS2Q9NVX0 235 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 ARMCX3Q9UH62 379 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-212ENST00000560801 N4BP1O75113 896 aaKnown RBP10.55□□□□□ -0.72
TRPM1-212ENST00000560801 PARNO95453 639 aaKnown RBP10.55□□□□□ -0.72
TRPM1-212ENST00000560801 BCRP11274 1271 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 CDC27P30260 824 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 DDIT3P35638 169 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 CLCN3P51790 818 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 EMC2Q15006 297 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 SYMPKQ92797 1274 aaKnown RBP10.55□□□□□ -0.72
TRPM1-212ENST00000560801 MAML3Q96JK9 1138 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 NOC4LQ9BVI4 516 aaKnown RBP10.55□□□□□ -0.72
TRPM1-212ENST00000560801 CUEDC2Q9H467 287 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 KIF9Q9HAQ2 790 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 SLC39A2Q9NP94 309 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 JADE2Q9NQC1 790 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 SLC12A6Q9UHW9 1150 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 DOT1LQ8TEK3 1739 aa10.55□□□□□ -0.72
TRPM1-212ENST00000560801 CYP4A22Q5TCH4 519 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 FAM177A1Q8N128 213 aaPredicted RBP10.54□□□□□ -0.72
TRPM1-212ENST00000560801 MKL1Q969V6 931 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 ALS2CR12Q96Q35 445 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 MRPL9Q9BYD2 267 aaKnown RBP10.54□□□□□ -0.72
TRPM1-212ENST00000560801 PRMT7Q9NVM4 692 aaPredicted RBP10.54□□□□□ -0.72
TRPM1-212ENST00000560801 RGL1Q9NZL6 768 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 MAGED2Q9UNF1 606 aaPredicted RBP10.54□□□□□ -0.72
TRPM1-212ENST00000560801 SSX2IPQ9Y2D8 614 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 PTPN22Q9Y2R2 807 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 TCRBV5S4A2TA0A5A2 114 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 CLTBP09497 229 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 MCM6Q14566 821 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 NBPF20Q3BBV1 942 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 ARHGAP29Q52LW3 1261 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 PCNX4Q63HM2 1172 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 PPP2R2DQ66LE6 453 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 POTEDQ86YR6 584 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 SPC24Q8NBT2 197 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 IGDCC4Q8TDY8 1250 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 SEZ6LQ9BYH1 1024 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 MIS12Q9H081 205 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 MAGEF1Q9HAY2 307 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 A0A1W2PRG0 241 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 CARNS1A5YM72 827 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 ALDH2P05091 517 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 PSMC6P62333 389 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 PGM5Q15124 567 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 DCUN1D2Q6PH85 259 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 ZNF560Q96MR9 790 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 OSMRQ99650 979 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 FAN1Q9Y2M0 1017 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 TMCO5BA8MYB1 307 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 GAS2O43903 313 aaKnown RBP10.54□□□□□ -0.72
TRPM1-212ENST00000560801 ZNF165P49910 485 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms