RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 BBXQ8WY36 941 aaPredicted RBP11.57□□□□□ -0.56
LDLR-214ENST00000560628 ZNF689Q96CS4 500 aaPredicted RBP11.57□□□□□ -0.56
LDLR-214ENST00000560628 FTHL17Q9BXU8 183 aa11.57□□□□□ -0.56
LDLR-214ENST00000560628 UBE2ZQ9H832 354 aaPredicted RBP11.57□□□□□ -0.56
LDLR-214ENST00000560628 DISC1Q9NRI5 854 aa11.57□□□□□ -0.56
LDLR-214ENST00000560628 PPP4R2Q9NY27 417 aa11.57□□□□□ -0.56
LDLR-214ENST00000560628 PCDHA4Q9UN74 947 aa11.57□□□□□ -0.56
LDLR-214ENST00000560628 NOC2LQ9Y3T9 749 aaKnown RBP11.57□□□□□ -0.56
LDLR-214ENST00000560628 ADGRA3Q8IWK6 1321 aa11.57□□□□□ -0.56
LDLR-214ENST00000560628 COL1A2P08123 1366 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.56□□□□□ -0.56
LDLR-214ENST00000560628 WDR64B1ANS9 1081 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 GRM6O15303 877 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 MGEA5O60502 916 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 GAS7O60861 476 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 RPS6KA5O75582 802 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 C22orf31O95567 290 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 VTNP04004 478 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 LINC00271P0C7V0 271 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 KCNA5P22460 613 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 GATMP50440 423 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 KIZQ2M2Z5 673 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 TCEAL5Q5H9L2 206 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 CPLX2Q6PUV4 134 aaKnown RBP11.56□□□□□ -0.56
LDLR-214ENST00000560628 NPAS4Q8IUM7 802 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 BLIDQ8IZY5 108 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 TMEM40Q8WWA1 233 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 SLC5A5Q92911 643 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 UNC45AQ9H3U1 944 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 ERVK-5Q9HDB9 667 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 LRFN2Q9ULH4 789 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 ST3GAL5Q9UNP4 418 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 KCNJ14Q9UNX9 436 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 KDM3AQ9Y4C1 1321 aa11.56□□□□□ -0.56
LDLR-214ENST00000560628 COL4A4P53420 1690 aaPredicted RBP11.55□□□□□ -0.56
LDLR-214ENST00000560628 ZNF862O60290 1169 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 GPR32O75388 356 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 TDP2O95551 362 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 RB1P06400 928 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 STAG3L1P0CL83 205 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 CLCN3P51790 818 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 CRYBB1P53674 252 aaPredicted RBP11.55□□□□□ -0.56
LDLR-214ENST00000560628 SCRN1Q12765 414 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 UGCGQ16739 394 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 LRCH2Q5VUJ6 765 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 EFCAB12Q6NXP0 572 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 CRIPAKQ8N1N5 446 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 LRRC71Q8N4P6 559 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 CLP1Q92989 425 aaKnown RBP11.55□□□□□ -0.56
LDLR-214ENST00000560628 ZNF668Q96K58 619 aaPredicted RBP11.55□□□□□ -0.56
LDLR-214ENST00000560628 RIT2Q99578 217 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 OSMRQ99650 979 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 ADAM2Q99965 735 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 TEKT3Q9BXF9 490 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 SLKQ9H2G2 1235 aaPredicted RBP11.55□□□□□ -0.56
LDLR-214ENST00000560628 RC3H2Q9HBD1 1191 aaKnown RBP11.55□□□□□ -0.56
LDLR-214ENST00000560628 ALG13Q9NP73 1137 aaKnown RBP11.55□□□□□ -0.56
LDLR-214ENST00000560628 NRBP2Q9NSY0 501 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 PCDHB7Q9Y5E2 793 aa11.55□□□□□ -0.56
LDLR-214ENST00000560628 MRPL42Q9Y6G3 142 aaKnown RBP11.55□□□□□ -0.56
LDLR-214ENST00000560628 SIP14410 1827 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 TTC3P53804 2025 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 DENND3A2RUS2 1198 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 C5orf67F2Z3F1 127 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 H3BQ06 376 aaPredicted RBP11.54□□□□□ -0.56
LDLR-214ENST00000560628 M0R2N6 131 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 GPR182O15218 404 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 MAGEB2O15479 319 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 OATP04181 439 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 NLRP11P59045 1033 aaKnown RBP11.54□□□□□ -0.56
LDLR-214ENST00000560628 NPY5RQ15761 445 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 INF2Q27J81 1249 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 Q4G0T1 1027 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 TIGD5Q53EQ6 642 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 CMTR2Q8IYT2 770 aaKnown RBP11.54□□□□□ -0.56
LDLR-214ENST00000560628 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.54□□□□□ -0.56
LDLR-214ENST00000560628 FAM167AQ96KS9 214 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 C11orf84Q9BUA3 381 aaPredicted RBP11.54□□□□□ -0.56
LDLR-214ENST00000560628 C22orf23Q9BZE7 217 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 NSUN3Q9H649 340 aaKnown RBP11.54□□□□□ -0.56
LDLR-214ENST00000560628 GJB4Q9NTQ9 266 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 CEP131Q9UPN4 1083 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 AKT3Q9Y243 479 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 RWDD3Q9Y3V2 267 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 MYO7AQ13402 2215 aa11.54□□□□□ -0.56
LDLR-214ENST00000560628 REV3LO60673 3130 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 CYP3A7-CYP3A51PA0A087WV96 503 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 TMEM150BA6NC51 233 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 PSMD10O75832 226 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 CYP3A7P24462 503 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 SFNP31947 248 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
LDLR-214ENST00000560628 JAK3P52333 1124 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 PRKCEQ02156 737 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 NONOQ15233 471 aaKnown RBP eCLIP11.53□□□□□ -0.56
LDLR-214ENST00000560628 LEXMQ3ZCV2 418 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 ODR4Q5SWX8 454 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 FAM102BQ5T8I3 360 aa11.53□□□□□ -0.56
LDLR-214ENST00000560628 MIER3Q7Z3K6 550 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms