RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 BCAS4Q8TDM0 211 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 EIF2AK1Q9BQI3 630 aaKnown RBP7.47□□□□□ -1.21
AP4E1-203ENST00000560508 POTEB3A0JP26 581 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 LRRC53A6NM62 1247 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 SFI1A8K8P3 1242 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 POTECB2RU33 542 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 K7ERI5 159 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 NTSR2O95665 410 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 CASP1P29466 404 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 NAA25Q14CX7 972 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 NKX1-1Q15270 411 aaPredicted RBP7.47□□□□□ -1.21
AP4E1-203ENST00000560508 POTEBQ6S5H4 581 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 STAG2Q8N3U4 1231 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 RUBCNQ92622 972 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.47□□□□□ -1.21
AP4E1-203ENST00000560508 INTS9Q9NV88 658 aaKnown RBP7.47□□□□□ -1.21
AP4E1-203ENST00000560508 PODXL2Q9NZ53 605 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 MEGF6O75095 1541 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 KCNQ2O43526 872 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 FDX1P10109 184 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 ARID5BQ14865 1188 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 PADI6Q6TGC4 694 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 CAPN12Q6ZSI9 719 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 RMDN3Q96TC7 470 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 TIPINQ9BVW5 301 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 STK38LQ9Y2H1 464 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 CAPN7Q9Y6W3 813 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 LTN1O94822 1766 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 ANO9A1A5B4 782 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 E9PMD0 336 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 CCDC188H7C350 402 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 CPP00450 1065 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 P4HBP07237 508 aaKnown RBP7.47□□□□□ -1.21
AP4E1-203ENST00000560508 QRICH1Q2TAL8 776 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 DARS2Q6PI48 645 aaKnown RBP7.47□□□□□ -1.21
AP4E1-203ENST00000560508 FRMD5Q7Z6J6 570 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 GSDMBQ8TAX9 411 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 ZNF302Q9NR11 478 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 ATP8A1Q9Y2Q0 1164 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 SPATA31A5Q5VU36 1347 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 SPATA31A7Q8IWB4 1347 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 GOLGA8QA0A0J9YX86 632 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 A0A1B0GUA9 196 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 GOLGA8OA6NCC3 632 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L15C9J2P7 530 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L13C9JLJ4 530 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L11C9JVI0 530 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L18D6R9N7 530 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L22D6RA61 530 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L17D6RBQ6 530 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L19D6RCP7 530 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L20D6RJB6 530 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 POC1B-GALNT4F8VUJ3 575 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 GOLGA8NF8WBI6 632 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 HGSO14964 777 aaPredicted RBP7.46□□□□□ -1.21
AP4E1-203ENST00000560508 ZMYND10O75800 440 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 SUN1O94901 812 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 VAMP7P51809 220 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 RWDD2BP57060 319 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 YWHAGP61981 247 aaKnown RBP eCLIP7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L24Q0WX57 530 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 KCNH2Q12809 1159 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 PDIA5Q14554 519 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 USP17L6PQ6QN14 398 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 TBC1D16Q8TBP0 767 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 ITIH6Q6UXX5 1313 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 GOLGA8CPA6NN73 597 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 SRGAP2CP0DJJ0 459 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.21
AP4E1-203ENST00000560508 MARK3P27448 753 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 CCDC197Q8NCU1 140 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 TRIM56Q9BRZ2 755 aaKnown RBP7.46□□□□□ -1.21
AP4E1-203ENST00000560508 PFDN4Q9NQP4 134 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 MAD1L1Q9Y6D9 718 aa7.46□□□□□ -1.21
AP4E1-203ENST00000560508 HMGB1P1B2RPK0 211 aaPredicted RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 PODXLO00592 558 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 SLC16A3O15427 465 aaKnown RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 SART1O43290 800 aaKnown RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 MYBL1P10243 752 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 GPC3P51654 580 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 SLC7A5Q01650 507 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 GFPT1Q06210 699 aaPredicted RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 DMTNQ08495 405 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 DPYDQ12882 1025 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 IFRD2Q12894 506 aaPredicted RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 ALKBH5Q6P6C2 394 aaKnown RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 PCGF5Q86SE9 256 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 METTL16Q86W50 562 aaKnown RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 ELOA2Q8IYF1 753 aaPredicted RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 PLCD3Q8N3E9 789 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 HEXIM2Q96MH2 286 aaKnown RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 FMO2Q99518 471 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 ZMYND12Q9H0C1 365 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 INTS2Q9H0H0 1204 aaKnown RBP7.46□□□□□ -1.22
AP4E1-203ENST00000560508 FAN1Q9Y2M0 1017 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 POTEFA5A3E0 1075 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 PRPSAP2O60256 369 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 TJP3O95049 919 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 POTEIP0CG38 1075 aa7.46□□□□□ -1.22
AP4E1-203ENST00000560508 STAT3P40763 770 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms