RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 PRPF38BQ5VTL8 546 aaKnown RBP17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 ARL6IP4Q66PJ3 421 aaKnown RBP17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 CATSPER3Q86XQ3 398 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 CCDC155Q8N6L0 562 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 ERMNQ8TAM6 284 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 NIFKQ9BYG3 293 aaKnown RBP17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 RAB34Q9BZG1 259 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 TFIP11Q9UBB9 837 aaKnown RBP17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 CSF2RAP15509 400 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 MARCKSP29966 332 aaPredicted RBP17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 NPEPPSP55786 919 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 RBL2Q08999 1139 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 PDIA5Q14554 519 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 TARBP2Q15633 366 aaKnown RBP17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 ZNF618Q5T7W0 954 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 TAF2Q6P1X5 1199 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 TRAF7Q6Q0C0 670 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 POTEGQ6S5H5 508 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 CHRDL2Q6WN34 429 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 LRRC8DQ7L1W4 858 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 ZNF579Q8NAF0 562 aaKnown RBP17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 RETREG2Q8NC44 543 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 SNX29Q8TEQ0 813 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 DNAJB3Q8WWF6 145 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 GDF15Q99988 308 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 POLR3CQ9BUI4 534 aaPredicted RBP17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 TUFT1Q9NNX1 390 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 PCDHA2Q9Y5H9 948 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 LOXHD1Q8IVV2 1947 aa17.36■□□□□ 0.37
LYSMD2-204ENST00000560491 LYPLA2O95372 231 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 IQCF3P0C7M6 154 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 SELPP16109 830 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 RPA1P27694 616 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 DDIT3P35638 169 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 CCT6AP40227 531 aaKnown RBP17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 EPHB4P54760 987 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 FPGSQ05932 587 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 TMEM62Q0P6H9 643 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 ECM1Q16610 540 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 HAUS3Q68CZ6 603 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 LRRC71Q8N4P6 559 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 TMEM199Q8N511 208 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 METTL13Q8N6R0 699 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 PIGOQ8TEQ8 1089 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 CHAMP1Q96JM3 812 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 ZNF396Q96N95 335 aaPredicted RBP17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 CEP89Q96ST8 783 aa17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 MMTAG2Q9BU76 263 aaKnown RBP17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 FBXO2Q9UK22 296 aaPredicted RBP17.35■□□□□ 0.37
LYSMD2-204ENST00000560491 SMIM35A0A1B0GVV1 85 aa17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 ACRP10323 421 aa17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 NASPP49321 788 aaPredicted RBP17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 CLCN3P51790 818 aa17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 DNM1Q05193 864 aaKnown RBP17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 TBC1D8BQ0IIM8 1120 aa17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 SLC39A14Q15043 492 aa17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 XKR9Q5GH70 373 aa17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 CEP170P1Q96L14 293 aa17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 CYP26B1Q9NR63 512 aa17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 BMP2KQ9NSY1 1161 aaPredicted RBP17.34■□□□□ 0.37
LYSMD2-204ENST00000560491 TET1Q8NFU7 2136 aa17.33■□□□□ 0.37
LYSMD2-204ENST00000560491 MBTPS1Q14703 1052 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 GPNMBQ14956 572 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 STK38Q15208 465 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 ZRSR1Q15695 479 aaKnown RBP17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 KRT79Q5XKE5 535 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 EFCAB12Q6NXP0 572 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 OTUD6AQ7L8S5 288 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 DEFB128Q7Z7B8 93 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 KIAA0319LQ8IZA0 1049 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 LINC01465Q8N7H1 131 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 LINC00301Q8NCQ3 95 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 VWCEQ96DN2 955 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 CLIC6Q96NY7 704 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 PPP1R16BQ96T49 567 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 OSBPL7Q9BZF2 842 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 UBE2OQ9C0C9 1292 aaKnown RBP17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 SUGCTQ9HAC7 445 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 TSHZ2Q9NRE2 1034 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 TCHHQ07283 1943 aa17.33■□□□□ 0.36
LYSMD2-204ENST00000560491 RSPH10B2B2RC85 870 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 MAGEB2O15479 319 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 CAND2O75155 1236 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 RSPH10BP0C881 870 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 MRPS6P82932 125 aaKnown RBP17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 MGAT3Q09327 533 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 PPIGQ13427 754 aaKnown RBP eCLIP17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 DRP2Q13474 957 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 SPECC1Q5M775 1068 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 RPAINQ86UA6 219 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 RSPH3Q86UC2 560 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 CSRNP2Q9H175 543 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 PRO3102Q9H379 93 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 IL23AQ9NPF7 189 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 ANKEF1Q9NU02 776 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 DDX19AQ9NUU7 478 aaKnown RBP17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 KIAA1024Q9UPX6 916 aa17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 SRPRBQ9Y5M8 271 aaKnown RBP17.32■□□□□ 0.36
LYSMD2-204ENST00000560491 STK24Q9Y6E0 443 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms