RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 GUF1Q8N442 669 aaKnown RBP9.55□□□□□ -0.88
TRAF3-209ENST00000560463 SLC17A8Q8NDX2 589 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 PPTC7Q8NI37 304 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 TRIM47Q96LD4 638 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 SPATA33Q96N06 139 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 SMARCAD1Q9H4L7 1026 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 PARVGQ9HBI0 331 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 PDGFCQ9NRA1 345 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 OLFML3Q9NRN5 406 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 RNF186Q9NXI6 227 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 LARSQ9P2J5 1176 aaKnown RBP9.55□□□□□ -0.88
TRAF3-209ENST00000560463 KCNG1Q9UIX4 513 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 Q9Y3F1 56 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 ANK1P16157 1881 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 SYNRGQ9UMZ2 1314 aa9.55□□□□□ -0.88
TRAF3-209ENST00000560463 NPHP3-ACAD11A0A0J9YXS1 232 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 PPFIA4O75335 1185 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 DGAT1O75907 488 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 FAM13AO94988 1023 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 STBD1O95210 358 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 TBC1D8O95759 1140 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 MAPTP10636 758 aaKnown RBP9.54□□□□□ -0.88
TRAF3-209ENST00000560463 CCNE1P24864 410 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 HOXD10P28358 340 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 ADCYAP1R1P41586 468 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 TNFAIP2Q03169 654 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 RAD51AP2Q09MP3 1159 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 NCAPHQ15003 741 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 HSDL1Q3SXM5 330 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 SPATA1Q5VX52 437 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 SARM1Q6SZW1 724 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 STXBP4Q6ZWJ1 553 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 SMYD4Q8IYR2 804 aaPredicted RBP9.54□□□□□ -0.88
TRAF3-209ENST00000560463 MCPH1Q8NEM0 835 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
TRAF3-209ENST00000560463 DRC1Q96MC2 740 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 RUSC1Q9BVN2 902 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 NIFKQ9BYG3 293 aaKnown RBP9.54□□□□□ -0.88
TRAF3-209ENST00000560463 C17orf75Q9HAS0 396 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 SLC39A2Q9NP94 309 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 CYP26B1Q9NR63 512 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 ZHX1Q9UKY1 873 aaPredicted RBP9.54□□□□□ -0.88
TRAF3-209ENST00000560463 GDAQ9Y2T3 454 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 PCDHA2Q9Y5H9 948 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 UBE4BO95155 1302 aa9.54□□□□□ -0.88
TRAF3-209ENST00000560463 EIF3DO15371 548 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRAF3-209ENST00000560463 HIP1RO75146 1068 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 ZNF865P0CJ78 1059 aaPredicted RBP9.53□□□□□ -0.88
TRAF3-209ENST00000560463 HOXD8P13378 290 aaPredicted RBP9.53□□□□□ -0.88
TRAF3-209ENST00000560463 ATP4AP20648 1035 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 SCP2P22307 547 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 CTGFP29279 349 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 ABCD1P33897 745 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 DEKP35659 375 aaKnown RBP9.53□□□□□ -0.88
TRAF3-209ENST00000560463 RFC5P40937 340 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 RTP1P59025 263 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 LRRC63Q05C16 580 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 TPD52L1Q16890 204 aaPredicted RBP9.53□□□□□ -0.88
TRAF3-209ENST00000560463 UTP14CQ5TAP6 766 aaKnown RBP9.53□□□□□ -0.88
TRAF3-209ENST00000560463 MFSD14CQ5VZR4 134 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 CENPPQ6IPU0 288 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 MYOCDQ8IZQ8 938 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 MYCT1Q8N699 235 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 KIAA0895Q8NCT3 520 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 NELFBQ8WX92 580 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 KIFAP3Q92845 792 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 GLG1Q92896 1179 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 COPS5Q92905 334 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 P2RX5Q93086 422 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 CEP170P1Q96L14 293 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 PCYT2Q99447 389 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 ZHX3Q9H4I2 956 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 PDLIM7Q9NR12 457 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 ERAP1Q9NZ08 941 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 FLRT1Q9NZU1 646 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 SEPT9Q9UHD8 586 aaPredicted RBP9.53□□□□□ -0.88
TRAF3-209ENST00000560463 FAM184BQ9ULE4 1060 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 CTNND2Q9UQB3 1225 aa9.53□□□□□ -0.88
TRAF3-209ENST00000560463 COL1A2P08123 1366 aa9.52□□□□□ -0.88
TRAF3-209ENST00000560463 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 GAS2O43903 313 aaKnown RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 HBP1O60381 514 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 SORBS3O60504 671 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 USO1O60763 962 aaKnown RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 FGFR1OPO95684 399 aaKnown RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 SMPD1P17405 629 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 CYP2C19P33261 490 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 FLT3LGP49771 235 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 PRMT2P55345 433 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 NPEPPSP55786 919 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 CACNB1Q02641 598 aaPredicted RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 SPAG1Q07617 926 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 CCDC173Q0VFZ6 552 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 ALCAMQ13740 583 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 PDCD11Q14690 1871 aaKnown RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 CCL14Q16627 93 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 DGKDQ16760 1214 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 BMT2Q1RMZ1 405 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 BRDTQ58F21 947 aaPredicted RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 ODR4Q5SWX8 454 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms